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TISSUE PRIMARY DATA SPINAL CORD Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
SPINAL CORD - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:114.1 nTPM
HPA:114.1 nTPM
GTEx:86.2 nTPM
FANTOM5:76.0 Scaled Tags Per Million
Pig:111.4 nTPM

SPINAL CORD - HPA Brain RNA-seq
Max nTPM 114.1
Sample id Sample description nTPM
Cervical spinal cord, central gray
nTPM: 107.1
1981 Female, age 72, midline 117.5
2194 Female, age 79, both hemispheres 106.6
2048 Male, age 55, midline 105.3
2565 Male, age 75, midline 104.7
2816 Male, age 47, midline 101.3
Cervical spinal cord, dorsal horn
nTPM: 114.1
2173 Female, age 72, unknown 127.3
2296 Male, age 66, both hemispheres 120.3
2069 Male, age 47, both hemispheres 117.8
2297 Male, age 75, both hemispheres 109.6
1877 Male, age 55, unknown 106.9
2721 Male, age 90, both hemispheres 102.7
Cervical spinal cord, ventral horn
nTPM: 107.7
2068 Male, age 55, unknown 115.9
2098 Female, age 72, unknown 109.9
2480 Male, age 75, both hemispheres 109.0
2820 Female, age 79, both hemispheres 104.8
2295 Male, age 66, both hemispheres 104.2
2809 Male, age 90, both hemispheres 102.1

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 86.2
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 86.2
Samples: 159

Max nTPM: 169.7
Min nTPM: 55.0
Std nTPM: 18.9
Median nTPM: 82.3
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 169.7
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 153.7
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 144.9
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 140.7
GTEX-R55E-0011-R9A-SM-2TC6C 20-29 years, male 130.2
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 128.9
GTEX-QVUS-0011-R9A-SM-3GIJA 60-69 years, female 127.1
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 124.2
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 121.9
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 119.8
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 119.7
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 118.8
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 113.0
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 110.4
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 109.3
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 108.7
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 108.6
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 108.5
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 108.4
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 107.3
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 107.3
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 106.8
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 104.1
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 103.6
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 102.6
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 102.3
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 101.9
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 100.3
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 99.6
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 99.6
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 98.3
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 97.6
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 97.3
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 96.7
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 96.6
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 96.4
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 95.7
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 95.3
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 95.1
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 94.9
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 94.8
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 94.4
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 94.0
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 93.8
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 93.2
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 93.0
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 92.3
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 92.1
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 91.3
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 91.2
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 91.0
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 91.0
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 90.3
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 89.7
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 89.6
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 89.4
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 88.9
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 88.7
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 88.7
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 88.7
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 88.5
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 88.4
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 88.4
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 88.3
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 87.1
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 86.7
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 86.3
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 86.0
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 85.9
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 85.3
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 85.1
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 84.5
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 84.5
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 84.2
GTEX-NPJ8-0011-R9a-SM-2YUN5 40-49 years, male 83.8
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 83.8
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 83.6
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 83.1
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 83.0
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 82.3
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 82.3
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 82.2
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 82.1
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 81.7
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 81.5
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 81.4
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 81.2
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 80.8
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 80.7
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 79.8
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 79.7
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 79.3
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 79.1
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 79.1
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 78.9
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 78.7
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 78.5
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 78.0
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 77.5
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 77.4
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 76.9
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 76.5
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 76.4
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 76.2
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 76.0
GTEX-NPJ7-0011-R9a-SM-2TC5R 60-69 years, female 76.0
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 75.9
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 75.7
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 75.7
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 75.4
GTEX-Q2AG-0011-R9A-SM-2HMJ6 40-49 years, female 75.1
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 74.7
GTEX-RNOR-0011-R9A-SM-2TF52 50-59 years, female 74.7
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 74.5
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 74.4
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 74.2
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 74.1
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 74.0
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 73.4
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 73.3
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 73.2
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 73.0
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 72.9
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 72.8
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 72.7
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 72.4
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 72.2
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 71.9
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 71.4
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 71.2
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 71.2
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 70.6
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 70.5
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 70.2
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 70.1
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 69.1
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 69.1
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 69.1
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 69.0
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 68.9
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 68.3
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 66.4
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 65.7
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 65.1
GTEX-18464-0011-R9a-SM-731BK 50-59 years, male 65.0
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 64.8
GTEX-1J1OQ-0011-R9b-SM-ARZMK 40-49 years, female 64.8
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 64.6
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 63.0
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 62.8
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 61.9
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 61.8
GTEX-RU72-0011-R9A-SM-2TF67 50-59 years, female 61.0
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 60.8
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 59.3
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 59.3
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 58.3
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 56.4
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 55.0
Show allShow less

SPINAL CORD - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 76.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Spinal cord
Scaled Tags Per Million: 76.0
FF:10181-103D1 60 years, female 76.8
FF:10159-103A6 76 years, female 75.2

SPINAL CORD - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 111.4
Pig sample Sample description nTPM
Dorsal spinal cord
nTPM: 79.5
Samples: 4

Max nTPM: 85.4
Min nTPM: 74.1
Sample A Female 85.4
Sample B Female 78.2
Sample C Male 74.1
Sample D Male 80.4
Ventral spinal cord
nTPM: 111.4
Samples: 4

Max nTPM: 128.0
Min nTPM: 101.5
Sample A Female 109.5
Sample B Female 128.0
Sample C Male 106.7
Sample D Male 101.5

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