HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:233.8 nTPM
HPA:233.8 nTPM
GTEx:396.0 nTPM
FANTOM5:276.1 Scaled Tags Per Million
Pig:101.9 nTPM
Mouse:119.3 nTPM
Allen mouse:1.2 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 233.8
Sample id Sample description nTPM
Hippocampus
nTPM: 220.0
2529 Female, age 94, left hemisphere 235.9
1911 Female, age 85, right hemisphere 227.0
2621 Female, age 67, right hemisphere 226.4
1855 Male, age 76, left hemisphere 216.7
1898 Male, age 80, left hemisphere 207.6
2148 Female, age 91, left hemisphere 206.5
Dentate gyrus
nTPM: 228.7
2530 Female, age 94, left hemisphere 360.5
2531 Female, age 67, both hemispheres 233.3
2010 Male, age 76, both hemispheres 216.5
2246 Female, age 85, both hemispheres 201.0
2528 Male, age 74, both hemispheres 188.5
1927 Female, age 91, both hemispheres 172.3
Entorhinal gyrus
nTPM: 222.5
2686 Male, age 75, right hemisphere 293.6
2117 Female, age 91, right hemisphere 236.7
2764 Male, age 80, right hemisphere 214.6
2613 Female, age 94, left hemisphere 206.0
1787 Male, age 76, left hemisphere 193.2
1938 Female, age 85, left hemisphere 191.1
Hippocampus, CA1
nTPM: 192.3
1873 Female, age 85, both hemispheres 205.0
2082 Female, age 91, right hemisphere 191.6
2749 Male, age 80, left hemisphere 190.7
2527 Male, age 74, both hemispheres 187.5
2045 Male, age 76, both hemispheres 186.6
Hippocampus, CA2
nTPM: 209.5
1963 Male, age 80, left hemisphere 242.9
2437 Female, age 94, left hemisphere 242.1
1940 Female, age 85, left hemisphere 196.9
2249 Male, age 74, both hemispheres 195.7
1892 Male, age 76, both hemispheres 190.5
2113 Female, age 91, right hemisphere 188.8
Hippocampus, CA3
nTPM: 193.4
1891 Female, age 85, both hemispheres 223.2
2861 Female, age 67, both hemispheres 212.0
1867 Male, age 76, both hemispheres 206.6
2137 Male, age 80, left hemisphere 177.0
2620 Female, age 94, left hemisphere 176.9
2436 Male, age 74, both hemispheres 164.7
Parahippocampal cortex
nTPM: 198.6
2532 Female, age 72, left hemisphere 244.0
2692 Male, age 74, both hemispheres 235.5
2622 Female, age 67, right hemisphere 224.9
2245 Female, age 91, both hemispheres 202.6
2018 Male, age 76, both hemispheres 196.3
1990 Female, age 91, right hemisphere 194.2
1933 Female, age 85, both hemispheres 180.5
1850 Male, age 80, both hemispheres 180.3
2693 Female, age 94, both hemispheres 166.5
2250 Female, age 67, right hemisphere 161.0
Perirhinal gyrus
nTPM: 163.0
2848 Male, age 76, right hemisphere 176.6
1847 Female, age 91, left hemisphere 162.9
1794 Male, age 80, right hemisphere 162.4
1841 Female, age 85, right hemisphere 159.3
2521 Female, age 94, right hemisphere 154.0
Subiculum
nTPM: 233.8
2438 Female, age 94, left hemisphere 268.6
2042 Male, age 76, both hemispheres 266.3
1901 Male, age 80, both hemispheres 250.9
1977 Female, age 85, both hemispheres 221.9
2619 Male, age 74, both hemispheres 201.6
2729 Female, age 91, right hemisphere 193.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 396.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 396.0
Samples: 197

Max nTPM: 2045.1
Min nTPM: 55.5
Std nTPM: 272.3
Median nTPM: 341.8
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 2045.1
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 1411.4
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 1242.0
GTEX-1GN2E-0011-R1b-SM-CE6RJ 60-69 years, male 1239.6
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 1219.8
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 1177.0
GTEX-1E1VI-0011-R1a-SM-ARZMM 50-59 years, male 1057.1
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 1052.4
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 1021.2
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 1019.0
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 991.6
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 276.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 276.1
FF:10153-102I9 76 years, female 294.9
FF:10169-103B7 60 years, female 257.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 101.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 101.9
Samples: 4

Max nTPM: 147.0
Min nTPM: 36.2
Sample A Female 145.7
Sample B Female 78.8
Sample C Male 147.0
Sample D Male 36.2
Entorhinal cortex
nTPM: 51.1
Samples: 4

Max nTPM: 61.9
Min nTPM: 42.5
Sample A Female 43.4
Sample B Female 61.9
Sample C Male 42.5
Sample D Male 56.6
Subiculum
nTPM: 39.3
Samples: 4

Max nTPM: 45.4
Min nTPM: 30.3
Sample A Female 45.4
Sample B Female 43.7
Sample C Male 30.3
Sample D Male 37.8
Ventral hippocampus
nTPM: 56.3
Samples: 4

Max nTPM: 82.6
Min nTPM: 30.5
Sample A Female 54.7
Sample B Female 30.5
Sample C Male 57.4
Sample D Male 82.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 119.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 104.5
Samples: 4

Max nTPM: 111.0
Min nTPM: 101.7
Sample A Male 111.0
Sample B Male 101.7
Sample C Female 103.5
Sample D Female 101.8
Hippocampal formation
nTPM: 119.3
Samples: 4

Max nTPM: 146.8
Min nTPM: 104.2
Sample A Male 105.7
Sample B Male 104.2
Sample C Female 146.8
Sample D Female 120.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.2
70192081 Antisense, RP_050517_01_C01, Mouse strain C57BL/6J (56 days, male) 1.2

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.