COLON - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:42.2 nTPM
HPA:40.0 nTPM
GTEx:42.2 nTPM
FANTOM5:36.9 Scaled Tags Per Million

COLON - Annotated protein expression
Pending normal tissue analysis

COLON - HPA RNA-seqi
Average nTPM 40.0
overview
Male, age 54 		Colon sample 67
nTPM: 27.1
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 24.9
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 40.1
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 58.8
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 19.4
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 35.3
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 37.2
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 34.6
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 43.7
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 41.8
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 73.1
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 33.2
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 50.8
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 42.2
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 42.2
Samples: 373

Max nTPM: 120.8
Min nTPM: 11.4
Std nTPM: 19.7
Median nTPM: 36.8
GTEX-ZDTS-2726-SM-5L3E2 60-69 years, male 120.8
GTEX-1B996-2726-SM-7DUGG 60-69 years, male 113.2
GTEX-ZYFD-2226-SM-5E43P 50-59 years, male 110.7
GTEX-1PIEJ-1826-SM-EWRMN 20-29 years, female 108.8
GTEX-1LB8K-2526-SM-DIPEQ 50-59 years, male 96.9
GTEX-12WSM-1426-SM-5GCPA 60-69 years, male 95.0
GTEX-16BQI-2026-SM-7KULQ 30-39 years, female 92.7
GTEX-1PIIG-2126-SM-EXUSD 30-39 years, male 90.2
GTEX-17HG3-1126-SM-7DUFC 30-39 years, female 89.9
GTEX-1J8EW-2426-SM-CE6T5 60-69 years, female 89.0
GTEX-1I1GP-2826-SM-A9SKZ 50-59 years, male 88.7
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Colon - Transverse
Average nTPM: 38.3
Samples: 406

Max nTPM: 127.4
Min nTPM: 8.9
Std nTPM: 18.7
Median nTPM: 33.5
GTEX-11P7K-1526-SM-5EGI7 30-39 years, male 127.4
GTEX-Y5LM-1526-SM-4VDTA 40-49 years, female 125.8
GTEX-14JIY-3326-SM-6871E 60-69 years, male 116.6
GTEX-ZDYS-2326-SM-4WKG6 50-59 years, male 113.5
GTEX-14XAO-2026-SM-69LOI 60-69 years, female 104.6
GTEX-14E6E-1526-SM-5RQIG 30-39 years, male 103.4
GTEX-ZT9W-1826-SM-51MQX 50-59 years, male 97.0
GTEX-11EM3-1526-SM-5A5KN 20-29 years, female 91.7
GTEX-14PK6-1726-SM-6871J 70-79 years, female 91.3
GTEX-1399U-1926-SM-5IFH7 50-59 years, female 90.8
GTEX-111CU-1426-SM-5GZYP 50-59 years, male 88.1
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 36.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 36.9
FF:10014-101C5 62,83,84 years, mixed 36.9

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.