AMYGDALA - Expression summary
Mouse brain, Intensity
Amygdalai 		52.499
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:44.2 nTPM
HPA:44.2 nTPM
GTEx:45.7 nTPM
FANTOM5:54.4 Scaled Tags Per Million
Pig:28.2 nTPM
Mouse:186.1 nTPM
Allen mouse:8.6 Expression energy

AMYGDALA - Mouse brain profilei , antibody HPA011895
Amygdala mean intensity 52.499
intensityi
FRONT BACK
Nucleus of the lateral olfactory tract -
Basal medial amygdaloid nucleus 38.722
Basal lateral amygdala* -
Basal lateral amygdaloid nucleus 45.298
Cortical amygdala 10.148
Central amygdala 52.499
Medial amygdaloid nucleus 49.006

AMYGDALA - HPA Brain RNA-seq
Max nTPM 44.2
Sample id Sample description nTPM
Amygdala
nTPM: 41.3
2695 Female, age 67, right hemisphere 45.6
2814 Male, age 76, right hemisphere 42.0
1987 Female, age 91, left hemisphere 41.4
2517 Female, age 94, left hemisphere 39.2
2514 Male, age 75, right hemisphere 38.4
Basal amygdala
nTPM: 42.3
2685 Female, age 94, left hemisphere 44.8
2609 Male, age 75, right hemisphere 42.9
2243 Female, age 91, right hemisphere 42.5
2110 Male, age 80, left hemisphere 41.9
2827 Female, age 67, right hemisphere 41.1
1955 Male, age 76, both hemispheres 40.5
Central amygdala
nTPM: 44.2
2826 Female, age 94, left hemisphere 49.0
1905 Male, age 76, both hemispheres 44.6
2239 Male, age 80, left hemisphere 44.1
2701 Female, age 91, right hemisphere 43.9
2515 Male, age 75, right hemisphere 39.2
Corticomedial amygdala
nTPM: 41.2
2535 Female, age 67, right hemisphere 44.9
2242 Female, age 91, right hemisphere 41.7
2428 Male, age 75, right hemisphere 41.2
2829 Male, age 80, left hemisphere 41.1
2429 Female, age 94, left hemisphere 40.3
2240 Male, age 76, both hemispheres 38.1
Lateral amygdala
nTPM: 44.2
2255 Female, age 91, right hemisphere 47.5
2256 Male, age 80, left hemisphere 47.1
2534 Female, age 94, left hemisphere 45.3
1883 Male, age 76, both hemispheres 42.2
2516 Male, age 75, right hemisphere 41.8
2830 Female, age 67, right hemisphere 41.2
Stria terminalis, bed nucleus
nTPM: 39.6
2201 Male, age 74, unknown 40.6
1974 Female, age 91, both hemispheres 39.0
2486 Female, age 94, both hemispheres 39.0

AMYGDALA - GTEx RNA-seqi
Average nTPM 45.7
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 45.7
Samples: 152

Max nTPM: 78.5
Min nTPM: 26.8
Std nTPM: 8.3
Median nTPM: 44.7
GTEX-X4EP-0011-R4B-SM-3P627 60-69 years, female 78.5
GTEX-1H2FU-0011-R4a-SM-CL551 60-69 years, female 69.5
GTEX-13NYS-0011-R4b-SM-5MR3O 60-69 years, male 67.1
GTEX-13FLV-0011-R4a-SM-5LZYU 50-59 years, male 65.5
GTEX-13JVG-0011-R4a-SM-5MR4C 60-69 years, male 61.1
GTEX-15DDE-0011-R4b-SM-7KULI 50-59 years, female 60.7
GTEX-183WM-0011-R4a-SM-7LG6S 70-79 years, female 60.7
GTEX-1EX96-0011-R4a-SM-ARU82 50-59 years, male 60.0
GTEX-13OW7-0011-R4b-SM-5O9CX 50-59 years, male 59.9
GTEX-1E1VI-0011-R4b-SM-9QEHV 50-59 years, male 59.1
GTEX-1JN6P-0011-R4a-SM-EZ6MS 60-69 years, male 58.1
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AMYGDALA - FANTOM5 CAGEi
Max Scaled Tags Per Million 54.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 54.4
FF:10151-102I7 76 years, female 54.4

AMYGDALA - Pig RNA-seqi
Average nTPM 28.2
Pig sample Sample description nTPM
Amygdala
nTPM: 28.2
Samples: 4

Max nTPM: 37.6
Min nTPM: 23.8
Sample A Female 37.6
Sample B Female 23.8
Sample C Male 24.7
Sample D Male 26.8

AMYGDALA - Mouse RNA-seqi
Average nTPM 186.1
Mouse sample Sample description nTPM
Amygdala
nTPM: 186.1
Samples: 4

Max nTPM: 194.7
Min nTPM: 178.4
Sample A Male 190.0
Sample B Male 178.4
Sample C Female 194.7
Sample D Female 181.3

AMYGDALA - Allen Mouse ISHi
Max Expression energy 8.6
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 8.6
69873457 Antisense, RP_050512_01_C10, Mouse strain C57BL/6J (56 days, male) 8.6

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.