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SLC1A3
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  • SLC1A3
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Medium
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:368.4 nTPM
FANTOM5:1397.8 Scaled Tags Per Million
Pig:552.6 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA037467Antibody CAB002573
Glial cells MediumMedium
Neuronal cells Not detectedNot detected




CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 368.4
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 368.4
Samples: 246

Max nTPM: 828.8
Min nTPM: 55.4
Std nTPM: 154.0
Median nTPM: 348.8
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 828.8
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 817.0
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 811.1
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 764.8
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 762.7
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 751.8
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 731.6
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 702.2
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 701.6
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 701.1
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 680.6
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 675.5
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 675.2
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 668.5
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 653.6
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 649.7
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 645.5
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 642.9
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 639.5
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 636.2
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 624.8
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 615.5
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 591.4
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 577.5
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 575.8
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 575.8
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 563.3
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 561.0
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 556.3
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 554.2
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 551.9
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 548.0
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 544.8
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 542.7
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 542.6
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 536.8
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 532.2
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 529.5
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 526.9
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 526.0
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 522.1
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 508.1
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 505.7
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 502.2
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 496.8
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 495.4
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 494.8
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 488.9
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 487.0
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 486.9
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 484.1
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 484.1
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 477.9
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 477.0
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 473.2
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 473.0
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 472.9
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 466.2
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 457.4
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 455.2
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 451.9
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 450.7
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 450.4
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 445.0
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 444.6
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 443.1
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 442.9
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 441.7
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 441.1
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 432.9
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 431.6
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 425.5
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 424.2
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 424.1
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 423.1
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 420.9
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 419.0
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 418.5
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 417.7
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 415.3
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 414.3
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 413.8
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 411.6
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 411.3
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 410.9
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 408.0
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 403.5
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 403.1
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 400.5
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 398.6
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 398.0
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 395.7
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 393.3
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 390.5
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 389.9
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 389.0
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 388.7
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 387.9
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 386.3
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 386.2
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 386.1
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 384.7
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 382.0
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 380.9
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 380.7
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 380.5
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 378.4
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 378.0
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 377.1
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 375.8
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 374.7
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 373.4
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 367.5
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 365.5
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 360.8
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 358.2
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 354.8
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 353.6
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 353.4
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 352.7
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 351.6
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 350.9
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 350.7
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 346.9
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 346.3
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 343.7
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 341.3
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 337.4
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 335.9
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 333.3
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 333.3
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 333.0
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 328.0
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 325.2
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 323.6
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 321.9
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 320.7
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 320.3
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 319.2
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 318.1
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 313.7
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 313.2
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 312.1
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 311.2
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 310.5
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 309.7
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 308.8
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 307.5
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 305.6
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 305.5
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 305.0
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 301.9
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 300.7
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 299.2
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 297.7
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 295.4
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 294.0
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 293.4
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 292.8
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 291.3
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 289.8
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 289.8
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 289.2
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 286.1
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 284.0
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 283.5
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 282.3
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 280.3
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 280.1
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 276.1
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 275.9
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 275.1
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 274.4
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 272.2
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 272.0
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 271.5
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 270.6
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 268.9
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 268.5
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 267.2
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 266.8
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 263.4
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 263.4
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 263.3
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 263.0
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 261.8
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 256.4
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 255.1
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 254.8
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 254.0
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 251.6
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 248.8
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 248.0
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 247.8
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 245.4
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 245.1
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 241.1
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 240.8
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 235.3
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 234.9
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 233.1
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 229.0
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 227.2
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 227.1
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 224.3
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 224.2
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 223.7
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 220.9
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 219.9
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 216.1
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 215.2
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 214.9
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 214.5
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 214.1
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 211.4
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 210.3
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 208.8
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 208.8
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 204.9
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 201.7
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 200.4
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 200.1
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 198.8
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 196.0
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 193.9
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 193.6
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 191.6
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 191.0
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 186.3
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 182.7
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 177.8
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 169.3
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 168.7
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 163.2
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 162.8
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 159.7
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 147.1
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 130.8
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 128.9
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 105.6
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 82.7
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 69.5
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 66.0
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 57.1
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 55.9
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 55.4
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 1397.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 1397.8
FF:10164-103B2 76 years, female 1397.8

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 552.6
Pig sample Sample description nTPM
Caudate
nTPM: 552.6
Samples: 4

Max nTPM: 686.4
Min nTPM: 406.4
Sample A Female 406.4
Sample B Female 583.1
Sample C Male 686.4
Sample D Male 534.4

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