HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:10.0 nTPM
HPA:10.0 nTPM
GTEx:84.5 nTPM
FANTOM5:202.5 Scaled Tags Per Million
Pig:73.0 nTPM
Mouse:73.8 nTPM
Allen mouse:1.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA008874
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 10.0
Sample id Sample description nTPM
Hippocampus
nTPM: 7.5
2148 Female, age 91, left hemisphere 8.5
2529 Female, age 94, left hemisphere 8.3
1911 Female, age 85, right hemisphere 8.0
1855 Male, age 76, left hemisphere 7.2
2621 Female, age 67, right hemisphere 7.0
1898 Male, age 80, left hemisphere 5.9
Dentate gyrus
nTPM: 10.0
2010 Male, age 76, both hemispheres 17.3
2530 Female, age 94, left hemisphere 13.4
2246 Female, age 85, both hemispheres 9.2
2528 Male, age 74, both hemispheres 8.1
2531 Female, age 67, both hemispheres 6.6
1927 Female, age 91, both hemispheres 5.7
Entorhinal gyrus
nTPM: 6.7
2764 Male, age 80, right hemisphere 9.0
2117 Female, age 91, right hemisphere 8.9
1787 Male, age 76, left hemisphere 8.0
2686 Male, age 75, right hemisphere 5.6
1938 Female, age 85, left hemisphere 5.2
2613 Female, age 94, left hemisphere 3.3
Hippocampus, CA1
nTPM: 9.1
2045 Male, age 76, both hemispheres 13.5
1873 Female, age 85, both hemispheres 12.6
2749 Male, age 80, left hemisphere 9.5
2082 Female, age 91, right hemisphere 5.6
2527 Male, age 74, both hemispheres 4.5
Hippocampus, CA2
nTPM: 7.9
1963 Male, age 80, left hemisphere 9.5
2249 Male, age 74, both hemispheres 9.4
2437 Female, age 94, left hemisphere 7.9
1940 Female, age 85, left hemisphere 7.7
2113 Female, age 91, right hemisphere 7.7
1892 Male, age 76, both hemispheres 5.2
Hippocampus, CA3
nTPM: 4.7
1891 Female, age 85, both hemispheres 8.3
2620 Female, age 94, left hemisphere 7.2
2861 Female, age 67, both hemispheres 4.7
1867 Male, age 76, both hemispheres 4.1
2436 Male, age 74, both hemispheres 3.2
2137 Male, age 80, left hemisphere 0.8
Parahippocampal cortex
nTPM: 6.7
2532 Female, age 72, left hemisphere 10.7
1933 Female, age 85, both hemispheres 8.5
2622 Female, age 67, right hemisphere 7.8
1990 Female, age 91, right hemisphere 6.7
1850 Male, age 80, both hemispheres 6.3
2692 Male, age 74, both hemispheres 6.3
2693 Female, age 94, both hemispheres 6.2
2245 Female, age 91, both hemispheres 5.5
2018 Male, age 76, both hemispheres 4.7
2250 Female, age 67, right hemisphere 4.5
Perirhinal gyrus
nTPM: 5.8
2848 Male, age 76, right hemisphere 7.5
2521 Female, age 94, right hemisphere 6.0
1794 Male, age 80, right hemisphere 5.5
1841 Female, age 85, right hemisphere 5.5
1847 Female, age 91, left hemisphere 4.3
Subiculum
nTPM: 7.7
2042 Male, age 76, both hemispheres 11.7
1977 Female, age 85, both hemispheres 10.9
2619 Male, age 74, both hemispheres 7.3
2729 Female, age 91, right hemisphere 7.3
2438 Female, age 94, left hemisphere 5.3
1901 Male, age 80, both hemispheres 3.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 84.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 84.5
Samples: 197

Max nTPM: 187.2
Min nTPM: 29.5
Std nTPM: 27.8
Median nTPM: 80.2
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 187.2
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 163.4
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 159.5
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 148.3
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 147.0
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 144.9
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 141.8
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 139.6
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 138.9
GTEX-1H3NZ-0011-R1a-SM-CKZP5 60-69 years, male 138.8
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 136.6
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 202.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 202.5
FF:10169-103B7 60 years, female 236.4
FF:10153-102I9 76 years, female 168.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 73.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 70.0
Samples: 4

Max nTPM: 99.0
Min nTPM: 46.1
Sample A Female 99.0
Sample B Female 79.6
Sample C Male 55.4
Sample D Male 46.1
Entorhinal cortex
nTPM: 68.7
Samples: 4

Max nTPM: 80.6
Min nTPM: 54.0
Sample A Female 80.6
Sample B Female 72.2
Sample C Male 67.9
Sample D Male 54.0
Subiculum
nTPM: 73.0
Samples: 4

Max nTPM: 89.6
Min nTPM: 62.8
Sample A Female 89.6
Sample B Female 73.4
Sample C Male 66.2
Sample D Male 62.8
Ventral hippocampus
nTPM: 71.7
Samples: 4

Max nTPM: 81.4
Min nTPM: 56.3
Sample A Female 70.9
Sample B Female 56.3
Sample C Male 78.0
Sample D Male 81.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 73.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 73.8
Samples: 4

Max nTPM: 81.0
Min nTPM: 69.0
Sample A Male 71.8
Sample B Male 73.3
Sample C Female 69.0
Sample D Female 81.0
Hippocampal formation
nTPM: 60.3
Samples: 4

Max nTPM: 69.2
Min nTPM: 55.4
Sample A Male 69.2
Sample B Male 55.4
Sample C Female 56.9
Sample D Female 59.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.9
75041432 Antisense, RP_060412_04_B02, Mouse strain C57BL/6J (56 days, male) 2.8
71232692 Antisense, RP_050428_03_F10, Mouse strain C57BL/6J (56 days, male) 1.0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.