HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:35.1 nTPM
HPA:35.1 nTPM
GTEx:28.4 nTPM
FANTOM5:14.5 Scaled Tags Per Million
Pig:28.3 nTPM
Mouse:17.9 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA035639
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 35.1
Sample id Sample description nTPM
Hippocampus
nTPM: 30.8
1898 Male, age 80, left hemisphere 34.0
2148 Female, age 91, left hemisphere 30.9
1855 Male, age 76, left hemisphere 30.6
2529 Female, age 94, left hemisphere 30.5
2621 Female, age 67, right hemisphere 29.8
1911 Female, age 85, right hemisphere 29.0
Dentate gyrus
nTPM: 31.5
2246 Female, age 85, both hemispheres 32.6
2528 Male, age 74, both hemispheres 32.3
2530 Female, age 94, left hemisphere 31.7
1927 Female, age 91, both hemispheres 31.5
2531 Female, age 67, both hemispheres 30.5
2010 Male, age 76, both hemispheres 30.3
Entorhinal gyrus
nTPM: 33.4
2764 Male, age 80, right hemisphere 35.6
1938 Female, age 85, left hemisphere 34.8
1787 Male, age 76, left hemisphere 34.4
2117 Female, age 91, right hemisphere 33.6
2613 Female, age 94, left hemisphere 31.0
2686 Male, age 75, right hemisphere 30.9
Hippocampus, CA1
nTPM: 31.5
2749 Male, age 80, left hemisphere 32.5
2527 Male, age 74, both hemispheres 32.3
2082 Female, age 91, right hemisphere 31.7
2045 Male, age 76, both hemispheres 31.0
1873 Female, age 85, both hemispheres 30.1
Hippocampus, CA2
nTPM: 31.2
1940 Female, age 85, left hemisphere 31.6
2249 Male, age 74, both hemispheres 31.4
2437 Female, age 94, left hemisphere 31.3
2113 Female, age 91, right hemisphere 31.2
1963 Male, age 80, left hemisphere 31.0
1892 Male, age 76, both hemispheres 30.7
Hippocampus, CA3
nTPM: 31.4
2620 Female, age 94, left hemisphere 34.3
2436 Male, age 74, both hemispheres 32.3
1867 Male, age 76, both hemispheres 31.2
2861 Female, age 67, both hemispheres 30.2
1891 Female, age 85, both hemispheres 30.1
2137 Male, age 80, left hemisphere 30.0
Parahippocampal cortex
nTPM: 32.0
1933 Female, age 85, both hemispheres 33.7
1990 Female, age 91, right hemisphere 33.5
2250 Female, age 67, right hemisphere 33.5
1850 Male, age 80, both hemispheres 33.1
2018 Male, age 76, both hemispheres 32.3
2693 Female, age 94, both hemispheres 31.8
2245 Female, age 91, both hemispheres 31.6
2532 Female, age 72, left hemisphere 30.9
2692 Male, age 74, both hemispheres 30.0
2622 Female, age 67, right hemisphere 29.2
Perirhinal gyrus
nTPM: 35.1
1847 Female, age 91, left hemisphere 37.2
1794 Male, age 80, right hemisphere 36.9
2521 Female, age 94, right hemisphere 34.2
2848 Male, age 76, right hemisphere 33.7
1841 Female, age 85, right hemisphere 33.3
Subiculum
nTPM: 31.6
1977 Female, age 85, both hemispheres 34.6
2729 Female, age 91, right hemisphere 32.6
2619 Male, age 74, both hemispheres 32.4
2438 Female, age 94, left hemisphere 31.7
1901 Male, age 80, both hemispheres 29.6
2042 Male, age 76, both hemispheres 28.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 28.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 28.4
Samples: 197

Max nTPM: 61.1
Min nTPM: 12.4
Std nTPM: 8.5
Median nTPM: 28.3
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 61.1
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 60.6
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 49.6
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 49.6
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 49.3
GTEX-X585-0011-R1B-SM-46MVE 50-59 years, male 48.8
GTEX-X4XX-0011-R1B-SM-3P622 60-69 years, male 48.4
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 46.0
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 43.9
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 43.0
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 42.7
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 14.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 14.5
FF:10153-102I9 76 years, female 15.5
FF:10169-103B7 60 years, female 13.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 28.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 28.3
Samples: 4

Max nTPM: 47.1
Min nTPM: 10.5
Sample A Female 47.1
Sample B Female 21.0
Sample C Male 34.7
Sample D Male 10.5
Entorhinal cortex
nTPM: 13.7
Samples: 4

Max nTPM: 17.0
Min nTPM: 11.2
Sample A Female 13.7
Sample B Female 17.0
Sample C Male 12.7
Sample D Male 11.2
Subiculum
nTPM: 17.7
Samples: 4

Max nTPM: 22.6
Min nTPM: 13.4
Sample A Female 22.6
Sample B Female 18.5
Sample C Male 16.3
Sample D Male 13.4
Ventral hippocampus
nTPM: 23.0
Samples: 4

Max nTPM: 28.7
Min nTPM: 16.2
Sample A Female 28.7
Sample B Female 16.2
Sample C Male 27.5
Sample D Male 19.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 17.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 17.9
Samples: 4

Max nTPM: 22.2
Min nTPM: 15.7
Sample A Male 15.7
Sample B Male 22.2
Sample C Female 17.5
Sample D Female 16.2
Hippocampal formation
nTPM: 15.7
Samples: 4

Max nTPM: 20.2
Min nTPM: 11.4
Sample A Male 20.2
Sample B Male 11.4
Sample C Female 15.2
Sample D Female 15.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
69782676 Antisense, RP_050505_03_E05, Mouse strain C57BL/6J (56 days, male) 0.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.