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EPB41L2
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TISSUE PRIMARY DATA SPINAL CORD Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
SPINAL CORD - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:66.8 nTPM
HPA:66.8 nTPM
GTEx:138.1 nTPM
FANTOM5:304.5 Scaled Tags Per Million
Pig:150.6 nTPM

SPINAL CORD - HPA Brain RNA-seq
Max nTPM 66.8
Sample id Sample description nTPM
Cervical spinal cord, central gray
nTPM: 53.5
2048 Male, age 55, midline 60.5
2816 Male, age 47, midline 60.0
1981 Female, age 72, midline 58.3
2194 Female, age 79, both hemispheres 50.3
2565 Male, age 75, midline 38.7
Cervical spinal cord, dorsal horn
nTPM: 66.8
2296 Male, age 66, both hemispheres 89.4
2173 Female, age 72, unknown 76.6
2069 Male, age 47, both hemispheres 71.0
1877 Male, age 55, unknown 64.8
2721 Male, age 90, both hemispheres 49.7
2297 Male, age 75, both hemispheres 49.3
Cervical spinal cord, ventral horn
nTPM: 66.6
2098 Female, age 72, unknown 77.3
2809 Male, age 90, both hemispheres 74.3
2068 Male, age 55, unknown 67.6
2295 Male, age 66, both hemispheres 66.6
2480 Male, age 75, both hemispheres 61.8
2820 Female, age 79, both hemispheres 52.2

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 138.1
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 138.1
Samples: 159

Max nTPM: 327.0
Min nTPM: 52.8
Std nTPM: 41.1
Median nTPM: 131.5
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 327.0
GTEX-Q2AG-0011-R9A-SM-2HMJ6 40-49 years, female 281.4
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 244.5
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 227.7
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 221.7
GTEX-RU72-0011-R9A-SM-2TF67 50-59 years, female 217.1
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 215.9
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 212.9
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 209.8
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 205.8
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 203.9
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 199.9
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 196.3
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 194.1
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 191.6
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 191.2
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 191.1
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 188.0
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 183.8
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 183.5
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 182.5
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 181.8
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 179.7
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 179.5
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 177.7
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 176.3
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 174.8
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 174.7
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 171.8
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 170.6
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 168.9
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 168.7
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 166.9
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 165.1
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 164.8
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 163.5
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 162.7
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 162.2
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 160.5
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 159.7
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 157.7
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 155.7
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 155.0
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 154.8
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 154.0
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 152.7
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 151.9
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 151.2
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 151.0
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 150.7
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 150.5
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 150.1
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 148.4
GTEX-18464-0011-R9a-SM-731BK 50-59 years, male 148.2
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 147.8
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 147.8
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 147.2
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 145.2
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 144.9
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 144.0
GTEX-1J1OQ-0011-R9b-SM-ARZMK 40-49 years, female 143.5
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 143.4
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 142.7
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 141.9
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 141.7
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 141.5
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 141.3
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 140.9
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 138.9
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 136.9
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 136.6
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 136.5
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 136.4
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 135.3
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 133.9
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 133.8
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 133.0
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 132.8
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 132.6
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 131.5
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 131.2
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 131.1
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 130.5
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 130.3
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 130.0
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 129.6
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 129.5
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 129.3
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 126.7
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 126.4
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 126.1
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 126.0
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 125.4
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 125.4
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 125.1
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 125.1
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 125.0
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 124.4
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 124.2
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 123.9
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 123.3
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 122.8
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 121.6
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 121.0
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 120.8
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 120.5
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 119.9
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 119.0
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 118.8
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 117.6
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 116.6
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 116.5
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 115.4
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 114.9
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 114.8
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 113.4
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 113.1
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 112.1
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 111.7
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 111.5
GTEX-NPJ7-0011-R9a-SM-2TC5R 60-69 years, female 111.0
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 110.6
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 110.3
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 109.8
GTEX-NPJ8-0011-R9a-SM-2YUN5 40-49 years, male 108.8
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 108.6
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 108.5
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 107.7
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 107.0
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 105.7
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 105.2
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 104.1
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 103.8
GTEX-QVUS-0011-R9A-SM-3GIJA 60-69 years, female 102.0
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 101.9
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 101.4
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 100.9
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 100.9
GTEX-R55E-0011-R9A-SM-2TC6C 20-29 years, male 100.6
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 97.5
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 95.8
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 95.5
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 95.4
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 91.5
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 89.1
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 88.1
GTEX-RNOR-0011-R9A-SM-2TF52 50-59 years, female 87.7
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 87.5
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 85.8
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 84.0
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 77.7
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 73.2
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 72.4
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 70.5
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 69.6
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 68.6
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 55.3
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 54.9
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 52.8
Show allShow less

SPINAL CORD - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 304.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Spinal cord
Scaled Tags Per Million: 304.5
FF:10181-103D1 60 years, female 386.2
FF:10159-103A6 76 years, female 222.9

SPINAL CORD - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 150.6
Pig sample Sample description nTPM
Dorsal spinal cord
nTPM: 150.6
Samples: 4

Max nTPM: 190.5
Min nTPM: 99.3
Sample A Female 99.3
Sample B Female 174.1
Sample C Male 190.5
Sample D Male 138.6
Ventral spinal cord
nTPM: 134.6
Samples: 4

Max nTPM: 148.7
Min nTPM: 116.5
Sample A Female 116.5
Sample B Female 129.7
Sample C Male 143.5
Sample D Male 148.7

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