COLON - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:31.6 nTPM
HPA:21.3 nTPM
GTEx:31.6 nTPM
FANTOM5:82.0 Scaled Tags Per Million

COLON - Annotated protein expression
Pending normal tissue analysis

COLON - HPA RNA-seqi
Average nTPM 21.3
overview
Male, age 54 		Colon sample 67
nTPM: 21.9
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 24.6
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 10.4
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 13.3
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 42.4
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 12.6
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 28.4
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 22.1
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 15.1
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 17.5
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 15
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 17.4
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 35.7
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 31.6
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 31.6
Samples: 373

Max nTPM: 70.9
Min nTPM: 10.2
Std nTPM: 12.4
Median nTPM: 30.1
GTEX-1QW4Y-1426-SM-E76P3 30-39 years, male 70.9
GTEX-145MO-2626-SM-5QGPD 60-69 years, male 68.6
GTEX-1IDJU-1926-SM-CL53W 60-69 years, female 66.8
GTEX-1L5NE-1926-SM-D3L9R 50-59 years, male 66.5
GTEX-1LGRB-2026-SM-COH47 50-59 years, female 65.0
GTEX-13RTJ-1926-SM-5YYA2 60-69 years, male 63.3
GTEX-111YS-1826-SM-5GIEP 60-69 years, male 62.8
GTEX-1J8Q3-2426-SM-CL53S 60-69 years, male 62.7
GTEX-16XZZ-2726-SM-7EWDO 60-69 years, male 61.7
GTEX-14E1K-1626-SM-664MO 50-59 years, male 61.3
GTEX-ZF28-2526-SM-57WFH 60-69 years, male 59.5
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Colon - Transverse
Average nTPM: 26.9
Samples: 406

Max nTPM: 89.3
Min nTPM: 8.8
Std nTPM: 12.1
Median nTPM: 24.3
GTEX-16XZZ-2626-SM-6M47S 60-69 years, male 89.3
GTEX-WY7C-1626-SM-4ONC8 50-59 years, male 87.0
GTEX-1QW4Y-1326-SM-EWRMZ 30-39 years, male 68.1
GTEX-111YS-1626-SM-5GZZ9 60-69 years, male 63.6
GTEX-V955-1626-SM-4JBHJ 60-69 years, male 61.2
GTEX-ZXES-1626-SM-5NQ7L 30-39 years, female 61.2
GTEX-1S3DN-1826-SM-EV79K 50-59 years, male 61.2
GTEX-1HSMQ-2726-SM-C1YRE 50-59 years, male 58.5
GTEX-1GZ4H-1226-SM-9KNUA 50-59 years, female 58.4
GTEX-1L5NE-2026-SM-CXZKR 50-59 years, male 58.3
GTEX-1IDJF-1826-SM-CKZOE 20-29 years, male 57.3
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 82.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 82.0
FF:10014-101C5 62,83,84 years, mixed 82.0

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The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.