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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
For selected proteins extended tissue profiling is performed in addition to standard tissue microarrays. The section below contains results from the extended profiling.
, antibody HPA029430
Pigment epithelial cells
Not detected
Photoreceptor cells
High
Limiting membrane
Not detected
Outer plexiform layer
High
Inner nuclear layer
Not detected
Inner plexiform layer
Medium
Ganglion cells
Not detected
Nerve fiber layer
Medium
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM: 123.7
Min nTPM: 16.5
Std nTPM: 18.9
Median nTPM:
145_1
84 years, male
123.7
41_1
94 years, female
113.5
322_1
76 years, male
109.5
447_1
81 years, male
103.4
518_1
75 years, female
97.1
307_1
66 years, female
87.2
375_1
74 years, female
84.6
319_1
81 years, male
83.5
318_1
68 years, male
83.4
311_1
78 years, male
83.0
324_1
76 years, male
78.9
386_1
76 years, male
75.7
490_1
67 years, female
74.2
218_1
71 years, female
73.9
495_1
57 years, female
72.6
315_1
62 years, female
72.0
4_1
88 years, female
69.9
237_1
82 years, male
68.8
139_1
64 years, female
68.0
348_1
84 years, male
67.0
347_1
72 years, male
64.8
350_1
84 years, female
64.8
17_1
71 years, male
64.6
119_1
70 years, female
64.5
313_1
79 years, female
62.0
153_1
70 years, female
61.9
321_1
62 years, female
61.0
316_1
62 years, male
60.7
351_1
91 years, male
60.6
35_1
74 years, female
59.8
335_1
73 years, female
59.6
6_1
73 years, female
58.5
43_1
64 years, female
57.4
264_1
73 years, female
56.0
405_1
91 years, male
56.0
120_1
70 years, female
55.6
293_1
68 years, female
55.2
491_1
89 years, female
55.1
353_1
82 years, female
54.6
81_1
67 years, male
53.7
243_1
75 years, male
53.4
499_1
55 years, female
53.2
251_1
78 years, male
52.9
265_1
87 years, male
52.9
89_1
63 years, male
52.8
137_1
83 years, male
52.8
266_1
85 years, male
52.8
9_1
66 years, female
52.5
173_1
67 years, male
52.1
18_1
88 years, male
51.4
526_1
61 years, male
50.5
149_1
88 years, male
49.5
501_1
88 years, male
49.5
292_1
71 years, male
49.0
354_1
81 years, female
48.4
308_1
70 years, female
48.2
406_1
79 years, male
48.1
379_1
60 years, male
47.9
162_1
79 years, female
47.5
413_1
59 years, female
47.4
415_1
77 years, female
47.3
466_1
57 years, female
46.9
396_1
62 years, male
46.8
126_1
63 years, male
46.3
254_1
77 years, female
46.2
468_1
89 years, male
46.1
291_1
76 years, male
45.7
320_1
89 years, female
45.5
506_1
65 years, male
44.6
189_1
76 years, male
44.2
376_1
75 years, female
44.2
389_1
86 years, female
43.7
414_1
84 years, female
43.0
246_1
77 years, male
42.6
384_1
83 years, male
42.6
217_1
76 years, male
42.5
377_1
82 years, female
40.6
425_1
59 years, female
40.0
32_1
67 years, male
39.9
355_1
70 years, female
39.8
2_1
77 years, female
39.0
42_1
85 years, male
38.8
109_1
81 years, female
38.6
177_1
74 years, male
38.6
163_1
78 years, male
37.3
356_1
87 years, female
37.2
349_1
83 years, male
37.1
99_1
64 years, male
35.9
117_1
61 years, male
35.4
172_1
72 years, female
35.4
142_1
61 years, female
35.0
517_1
88 years, male
35.0
229_1
69 years, female
34.7
317_1
60 years, male
34.4
288_1
66 years, female
33.7
404_1
82 years, female
33.5
115_1
83 years, male
33.4
286_1
68 years, female
32.8
352_1
62 years, male
31.8
452_1
88 years, female
31.7
503_1
68 years, male
31.7
480_1
63 years, male
30.6
314_1
67 years, male
29.9
295_1
61 years, female
29.2
394_1
75 years, female
16.5
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
