HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:341.4 nTPM
HPA:341.4 nTPM
GTEx:210.0 nTPM
FANTOM5:113.4 Scaled Tags Per Million
Mouse:413.7 nTPM
Allen mouse:11.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA019779Antibody HPA019869
Glial cells HighMedium
Neuronal cells MediumNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 341.4
Sample id Sample description nTPM
Hippocampus
nTPM: 331.8
2529 Female, age 94, left hemisphere 351.5
1898 Male, age 80, left hemisphere 339.9
2621 Female, age 67, right hemisphere 329.7
1855 Male, age 76, left hemisphere 329.5
1911 Female, age 85, right hemisphere 320.5
2148 Female, age 91, left hemisphere 319.4
Dentate gyrus
nTPM: 325.2
2528 Male, age 74, both hemispheres 344.3
2010 Male, age 76, both hemispheres 336.2
2530 Female, age 94, left hemisphere 333.1
2246 Female, age 85, both hemispheres 317.5
1927 Female, age 91, both hemispheres 310.0
2531 Female, age 67, both hemispheres 309.8
Entorhinal gyrus
nTPM: 319.6
2117 Female, age 91, right hemisphere 338.1
1787 Male, age 76, left hemisphere 328.3
2764 Male, age 80, right hemisphere 324.7
1938 Female, age 85, left hemisphere 321.8
2613 Female, age 94, left hemisphere 303.3
2686 Male, age 75, right hemisphere 301.2
Hippocampus, CA1
nTPM: 319.1
2527 Male, age 74, both hemispheres 339.8
2082 Female, age 91, right hemisphere 331.2
1873 Female, age 85, both hemispheres 314.7
2045 Male, age 76, both hemispheres 307.3
2749 Male, age 80, left hemisphere 302.7
Hippocampus, CA2
nTPM: 334.8
2249 Male, age 74, both hemispheres 398.9
1963 Male, age 80, left hemisphere 325.9
2113 Female, age 91, right hemisphere 325.7
2437 Female, age 94, left hemisphere 325.3
1940 Female, age 85, left hemisphere 323.8
1892 Male, age 76, both hemispheres 309.0
Hippocampus, CA3
nTPM: 341.4
2436 Male, age 74, both hemispheres 480.5
1891 Female, age 85, both hemispheres 320.7
2620 Female, age 94, left hemisphere 318.2
1867 Male, age 76, both hemispheres 314.1
2861 Female, age 67, both hemispheres 313.2
2137 Male, age 80, left hemisphere 301.6
Parahippocampal cortex
nTPM: 316.2
2250 Female, age 67, right hemisphere 327.9
2018 Male, age 76, both hemispheres 323.7
1933 Female, age 85, both hemispheres 322.4
2245 Female, age 91, both hemispheres 319.9
1990 Female, age 91, right hemisphere 319.4
1850 Male, age 80, both hemispheres 314.2
2692 Male, age 74, both hemispheres 314.2
2622 Female, age 67, right hemisphere 310.0
2532 Female, age 72, left hemisphere 309.9
2693 Female, age 94, both hemispheres 299.9
Perirhinal gyrus
nTPM: 314.7
1794 Male, age 80, right hemisphere 324.2
1847 Female, age 91, left hemisphere 321.4
1841 Female, age 85, right hemisphere 311.1
2848 Male, age 76, right hemisphere 308.6
2521 Female, age 94, right hemisphere 307.9
Subiculum
nTPM: 328.7
2042 Male, age 76, both hemispheres 339.5
2619 Male, age 74, both hemispheres 331.9
2729 Female, age 91, right hemisphere 328.0
1901 Male, age 80, both hemispheres 325.0
1977 Female, age 85, both hemispheres 324.8
2438 Female, age 94, left hemisphere 323.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 210.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 210.0
Samples: 197

Max nTPM: 363.9
Min nTPM: 87.8
Std nTPM: 53.4
Median nTPM: 206.1
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 363.9
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 362.1
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 361.0
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 356.3
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 327.7
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 318.9
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 311.7
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 309.8
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 308.5
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 305.5
GTEX-14PQA-0011-R1b-SM-6EU1G 50-59 years, female 303.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 113.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 113.4
FF:10169-103B7 60 years, female 125.5
FF:10153-102I9 76 years, female 101.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 413.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 0.8
Samples: 4

Max nTPM: 1.3
Min nTPM: 0.4
Sample A Male 0.6
Sample B Male 1.3
Sample C Female 0.4
Sample D Female 0.9
Hippocampal formation
nTPM: 0.6
Samples: 4

Max nTPM: 0.8
Min nTPM: 0.1
Sample A Male 0.8
Sample B Male 0.6
Sample C Female 0.7
Sample D Female 0.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 11.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 11.6
68910954 Antisense, RP_041208_02_A08, Mouse strain C57BL/6J (56 days, male) 11.6
Hippocampal formation
Expression energy: 11.6
68910954 Antisense, RP_041208_02_A08, Mouse strain C57BL/6J (56 days, male) 11.6

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.