HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:46.1 nTPM
HPA:46.1 nTPM
GTEx:49.1 nTPM
FANTOM5:133.9 Scaled Tags Per Million
Pig:48.6 nTPM
Mouse:99.3 nTPM
Allen mouse:5.4 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 46.1
Sample id Sample description nTPM
Hippocampus
nTPM: 25.9
2621 Female, age 67, right hemisphere 44.5
1898 Male, age 80, left hemisphere 39.9
2148 Female, age 91, left hemisphere 29.0
1855 Male, age 76, left hemisphere 24.1
1911 Female, age 85, right hemisphere 8.9
2529 Female, age 94, left hemisphere 8.8
Dentate gyrus
nTPM: 23.2
1927 Female, age 91, both hemispheres 49.0
2530 Female, age 94, left hemisphere 32.4
2531 Female, age 67, both hemispheres 18.5
2010 Male, age 76, both hemispheres 17.8
2246 Female, age 85, both hemispheres 14.7
2528 Male, age 74, both hemispheres 6.5
Entorhinal gyrus
nTPM: 32.4
2613 Female, age 94, left hemisphere 66.4
2764 Male, age 80, right hemisphere 42.8
1938 Female, age 85, left hemisphere 34.1
1787 Male, age 76, left hemisphere 28.4
2686 Male, age 75, right hemisphere 22.6
2117 Female, age 91, right hemisphere 0.0
Hippocampus, CA1
nTPM: 35.6
2749 Male, age 80, left hemisphere 100.4
2527 Male, age 74, both hemispheres 34.3
1873 Female, age 85, both hemispheres 26.0
2082 Female, age 91, right hemisphere 13.8
2045 Male, age 76, both hemispheres 3.5
Hippocampus, CA2
nTPM: 25.9
1963 Male, age 80, left hemisphere 48.4
1892 Male, age 76, both hemispheres 38.6
2437 Female, age 94, left hemisphere 21.6
2113 Female, age 91, right hemisphere 18.7
1940 Female, age 85, left hemisphere 14.7
2249 Male, age 74, both hemispheres 13.5
Hippocampus, CA3
nTPM: 27.6
2137 Male, age 80, left hemisphere 74.7
2861 Female, age 67, both hemispheres 42.4
2620 Female, age 94, left hemisphere 26.7
1867 Male, age 76, both hemispheres 13.0
2436 Male, age 74, both hemispheres 8.4
1891 Female, age 85, both hemispheres 0.2
Parahippocampal cortex
nTPM: 28.8
2245 Female, age 91, both hemispheres 54.6
1850 Male, age 80, both hemispheres 45.5
2693 Female, age 94, both hemispheres 31.0
2622 Female, age 67, right hemisphere 30.6
2250 Female, age 67, right hemisphere 29.5
1990 Female, age 91, right hemisphere 29.2
1933 Female, age 85, both hemispheres 28.2
2532 Female, age 72, left hemisphere 22.8
2692 Male, age 74, both hemispheres 12.2
2018 Male, age 76, both hemispheres 4.6
Perirhinal gyrus
nTPM: 46.1
1847 Female, age 91, left hemisphere 71.0
1794 Male, age 80, right hemisphere 55.2
2521 Female, age 94, right hemisphere 51.0
1841 Female, age 85, right hemisphere 30.8
2848 Male, age 76, right hemisphere 22.6
Subiculum
nTPM: 11.3
1901 Male, age 80, both hemispheres 23.8
1977 Female, age 85, both hemispheres 20.2
2619 Male, age 74, both hemispheres 14.8
2438 Female, age 94, left hemisphere 9.3
2042 Male, age 76, both hemispheres 0.0
2729 Female, age 91, right hemisphere 0.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 49.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 49.1
Samples: 197

Max nTPM: 137.5
Min nTPM: 8.1
Std nTPM: 28.8
Median nTPM: 42.1
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 137.5
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 136.3
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 129.0
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 119.1
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 116.1
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 112.6
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 111.7
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 111.6
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 107.7
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 106.5
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 105.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 133.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 133.9
FF:10169-103B7 60 years, female 157.9
FF:10153-102I9 76 years, female 109.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 48.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 45.5
Samples: 4

Max nTPM: 57.8
Min nTPM: 33.5
Sample A Female 57.8
Sample B Female 55.6
Sample C Male 35.0
Sample D Male 33.5
Entorhinal cortex
nTPM: 48.6
Samples: 4

Max nTPM: 56.0
Min nTPM: 43.5
Sample A Female 56.0
Sample B Female 43.5
Sample C Male 51.3
Sample D Male 43.7
Subiculum
nTPM: 44.9
Samples: 4

Max nTPM: 58.7
Min nTPM: 37.8
Sample A Female 58.7
Sample B Female 39.1
Sample C Male 44.0
Sample D Male 37.8
Ventral hippocampus
nTPM: 47.3
Samples: 4

Max nTPM: 59.9
Min nTPM: 30.7
Sample A Female 48.3
Sample B Female 30.7
Sample C Male 59.9
Sample D Male 50.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 99.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 99.4
Samples: 4

Max nTPM: 117.9
Min nTPM: 91.5
Sample A Male 91.5
Sample B Male 96.4
Sample C Female 91.6
Sample D Female 117.9
Hippocampal formation
nTPM: 94.2
Samples: 4

Max nTPM: 110.0
Min nTPM: 85.5
Sample A Male 85.5
Sample B Male 95.7
Sample C Female 110.0
Sample D Female 85.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 5.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.4
69735795 Antisense, RP_050503_03_E11, Mouse strain C57BL/6J (56 days, male) 9.9
70200848 Antisense, RP_050517_02_G02, Mouse strain C57BL/6J (56 days, male) 1.0

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