HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:27.7 nTPM
HPA:27.7 nTPM
GTEx:63.6 nTPM
FANTOM5:92.0 Scaled Tags Per Million
Pig:26.0 nTPM
Mouse:105.2 nTPM
Allen mouse:9.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA057242Antibody CAB011235
Glial cells Not detectedMedium
Neuronal cells LowMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 27.7
Sample id Sample description nTPM
Hippocampus
nTPM: 26.0
1898 Male, age 80, left hemisphere 27.5
2148 Female, age 91, left hemisphere 26.3
2529 Female, age 94, left hemisphere 26.1
1855 Male, age 76, left hemisphere 25.9
2621 Female, age 67, right hemisphere 25.2
1911 Female, age 85, right hemisphere 24.8
Dentate gyrus
nTPM: 26.1
2530 Female, age 94, left hemisphere 27.3
2010 Male, age 76, both hemispheres 27.1
2528 Male, age 74, both hemispheres 26.3
2531 Female, age 67, both hemispheres 25.6
2246 Female, age 85, both hemispheres 25.5
1927 Female, age 91, both hemispheres 25.1
Entorhinal gyrus
nTPM: 27.7
2686 Male, age 75, right hemisphere 28.7
2764 Male, age 80, right hemisphere 28.6
2613 Female, age 94, left hemisphere 28.5
2117 Female, age 91, right hemisphere 27.2
1787 Male, age 76, left hemisphere 26.8
1938 Female, age 85, left hemisphere 26.6
Hippocampus, CA1
nTPM: 27.0
2749 Male, age 80, left hemisphere 28.7
2082 Female, age 91, right hemisphere 27.0
2045 Male, age 76, both hemispheres 26.7
2527 Male, age 74, both hemispheres 26.4
1873 Female, age 85, both hemispheres 26.2
Hippocampus, CA2
nTPM: 26.9
1892 Male, age 76, both hemispheres 27.8
1963 Male, age 80, left hemisphere 27.7
2249 Male, age 74, both hemispheres 27.2
1940 Female, age 85, left hemisphere 26.8
2437 Female, age 94, left hemisphere 26.4
2113 Female, age 91, right hemisphere 25.7
Hippocampus, CA3
nTPM: 26.9
2137 Male, age 80, left hemisphere 29.0
1867 Male, age 76, both hemispheres 28.5
1891 Female, age 85, both hemispheres 26.9
2620 Female, age 94, left hemisphere 26.4
2436 Male, age 74, both hemispheres 25.6
2861 Female, age 67, both hemispheres 25.3
Parahippocampal cortex
nTPM: 26.3
1850 Male, age 80, both hemispheres 27.2
2692 Male, age 74, both hemispheres 27.2
2532 Female, age 72, left hemisphere 27.0
1990 Female, age 91, right hemisphere 26.7
2693 Female, age 94, both hemispheres 26.6
1933 Female, age 85, both hemispheres 26.5
2018 Male, age 76, both hemispheres 26.1
2245 Female, age 91, both hemispheres 25.5
2250 Female, age 67, right hemisphere 25.1
2622 Female, age 67, right hemisphere 25.0
Perirhinal gyrus
nTPM: 26.5
1794 Male, age 80, right hemisphere 27.9
2521 Female, age 94, right hemisphere 27.3
2848 Male, age 76, right hemisphere 25.9
1847 Female, age 91, left hemisphere 25.7
1841 Female, age 85, right hemisphere 25.6
Subiculum
nTPM: 26.7
1901 Male, age 80, both hemispheres 28.8
2042 Male, age 76, both hemispheres 27.3
1977 Female, age 85, both hemispheres 27.2
2619 Male, age 74, both hemispheres 26.0
2438 Female, age 94, left hemisphere 25.9
2729 Female, age 91, right hemisphere 25.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 63.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 63.6
Samples: 197

Max nTPM: 133.7
Min nTPM: 35.8
Std nTPM: 14.2
Median nTPM: 61.3
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 133.7
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 115.2
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 106.8
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 104.8
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 102.7
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 102.1
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 97.3
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 96.3
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 95.4
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 95.0
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 89.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 92.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 92.0
FF:10153-102I9 76 years, female 97.3
FF:10169-103B7 60 years, female 86.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 26.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 26.0
Samples: 4

Max nTPM: 34.0
Min nTPM: 20.2
Sample A Female 34.0
Sample B Female 25.1
Sample C Male 24.5
Sample D Male 20.2
Entorhinal cortex
nTPM: 21.3
Samples: 4

Max nTPM: 23.1
Min nTPM: 18.5
Sample A Female 23.1
Sample B Female 22.4
Sample C Male 21.2
Sample D Male 18.5
Subiculum
nTPM: 22.6
Samples: 4

Max nTPM: 31.0
Min nTPM: 18.9
Sample A Female 31.0
Sample B Female 19.3
Sample C Male 21.0
Sample D Male 18.9
Ventral hippocampus
nTPM: 25.2
Samples: 4

Max nTPM: 31.4
Min nTPM: 17.8
Sample A Female 23.0
Sample B Female 17.8
Sample C Male 31.4
Sample D Male 28.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 105.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 67.1
Samples: 4

Max nTPM: 73.0
Min nTPM: 59.7
Sample A Male 64.5
Sample B Male 59.7
Sample C Female 73.0
Sample D Female 71.3
Hippocampal formation
nTPM: 105.2
Samples: 4

Max nTPM: 116.7
Min nTPM: 93.9
Sample A Male 93.9
Sample B Male 114.0
Sample C Female 116.7
Sample D Female 96.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 9.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 9.8
70616018 Antisense, RP_050725_01_D11, Mouse strain C57BL/6J (56 days, male) 12.4
564759 Antisense, RP_040826_01_D04, Mouse strain C57BL/6J (56 days, male) 11.6
70919382 Antisense, RP_050713_01_C01, Mouse strain C57BL/6J (56 days, male) 5.4

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The Human Protein Atlas

The Human Protein Atlas project is funded
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