HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:15.2 nTPM
HPA:15.2 nTPM
GTEx:13.4 nTPM
FANTOM5:16.3 Scaled Tags Per Million
Pig:23.7 nTPM
Mouse:39.8 nTPM
Allen mouse:10.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA039722Antibody HPA040155
Glial cells Not detectedLow
Neuronal cells MediumMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 15.2
Sample id Sample description nTPM
Hippocampus
nTPM: 13.4
2621 Female, age 67, right hemisphere 16.3
2529 Female, age 94, left hemisphere 14.1
1855 Male, age 76, left hemisphere 13.1
1898 Male, age 80, left hemisphere 12.8
2148 Female, age 91, left hemisphere 12.5
1911 Female, age 85, right hemisphere 11.8
Dentate gyrus
nTPM: 12.2
2531 Female, age 67, both hemispheres 13.1
2530 Female, age 94, left hemisphere 13.0
2246 Female, age 85, both hemispheres 12.3
2528 Male, age 74, both hemispheres 11.9
1927 Female, age 91, both hemispheres 11.6
2010 Male, age 76, both hemispheres 11.4
Entorhinal gyrus
nTPM: 14.9
2613 Female, age 94, left hemisphere 18.4
2764 Male, age 80, right hemisphere 15.8
2686 Male, age 75, right hemisphere 15.7
1787 Male, age 76, left hemisphere 14.4
1938 Female, age 85, left hemisphere 12.7
2117 Female, age 91, right hemisphere 12.2
Hippocampus, CA1
nTPM: 12.7
2749 Male, age 80, left hemisphere 14.4
2527 Male, age 74, both hemispheres 13.9
2082 Female, age 91, right hemisphere 12.2
1873 Female, age 85, both hemispheres 11.8
2045 Male, age 76, both hemispheres 11.3
Hippocampus, CA2
nTPM: 12.3
2437 Female, age 94, left hemisphere 14.3
1963 Male, age 80, left hemisphere 14.0
1892 Male, age 76, both hemispheres 12.1
2113 Female, age 91, right hemisphere 11.6
2249 Male, age 74, both hemispheres 11.4
1940 Female, age 85, left hemisphere 10.4
Hippocampus, CA3
nTPM: 12.9
2861 Female, age 67, both hemispheres 16.6
2620 Female, age 94, left hemisphere 13.1
2137 Male, age 80, left hemisphere 13.0
2436 Male, age 74, both hemispheres 11.8
1891 Female, age 85, both hemispheres 11.5
1867 Male, age 76, both hemispheres 11.4
Parahippocampal cortex
nTPM: 15.0
2622 Female, age 67, right hemisphere 18.5
2693 Female, age 94, both hemispheres 16.3
2245 Female, age 91, both hemispheres 15.3
2250 Female, age 67, right hemisphere 15.1
2532 Female, age 72, left hemisphere 14.9
2692 Male, age 74, both hemispheres 14.5
1850 Male, age 80, both hemispheres 14.3
1933 Female, age 85, both hemispheres 13.8
2018 Male, age 76, both hemispheres 13.6
1990 Female, age 91, right hemisphere 13.5
Perirhinal gyrus
nTPM: 15.2
2521 Female, age 94, right hemisphere 16.3
1847 Female, age 91, left hemisphere 15.6
1794 Male, age 80, right hemisphere 15.5
2848 Male, age 76, right hemisphere 15.2
1841 Female, age 85, right hemisphere 13.6
Subiculum
nTPM: 12.6
2619 Male, age 74, both hemispheres 15.1
2438 Female, age 94, left hemisphere 14.2
1977 Female, age 85, both hemispheres 12.6
1901 Male, age 80, both hemispheres 11.9
2042 Male, age 76, both hemispheres 11.2
2729 Female, age 91, right hemisphere 10.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 13.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 13.4
Samples: 197

Max nTPM: 31.5
Min nTPM: 7.6
Std nTPM: 3.2
Median nTPM: 13.1
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 31.5
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 24.2
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 22.8
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 21.7
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 21.2
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 21.1
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 20.8
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 19.6
GTEX-X4XX-0011-R1B-SM-3P622 60-69 years, male 19.3
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 19.2
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 18.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 16.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 16.3
FF:10153-102I9 76 years, female 19.1
FF:10169-103B7 60 years, female 13.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 23.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 17.6
Samples: 4

Max nTPM: 21.1
Min nTPM: 12.2
Sample A Female 21.1
Sample B Female 17.9
Sample C Male 19.3
Sample D Male 12.2
Entorhinal cortex
nTPM: 23.6
Samples: 4

Max nTPM: 29.7
Min nTPM: 19.7
Sample A Female 23.0
Sample B Female 19.7
Sample C Male 29.7
Sample D Male 22.0
Subiculum
nTPM: 23.7
Samples: 4

Max nTPM: 30.7
Min nTPM: 20.5
Sample A Female 30.7
Sample B Female 22.1
Sample C Male 21.4
Sample D Male 20.5
Ventral hippocampus
nTPM: 20.0
Samples: 4

Max nTPM: 26.5
Min nTPM: 16.1
Sample A Female 17.5
Sample B Female 16.1
Sample C Male 26.5
Sample D Male 19.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 39.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 39.8
Samples: 4

Max nTPM: 44.3
Min nTPM: 35.7
Sample A Male 40.6
Sample B Male 38.5
Sample C Female 35.7
Sample D Female 44.3
Hippocampal formation
nTPM: 34.8
Samples: 4

Max nTPM: 36.8
Min nTPM: 31.9
Sample A Male 34.9
Sample B Male 36.8
Sample C Female 35.7
Sample D Female 31.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 10.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 10.1
71656816 Antisense, RP_050927_04_D05, Mouse strain C57BL/6J (56 days, male) 10.1

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