HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:28.1 nTPM
HPA:28.1 nTPM
GTEx:29.6 nTPM
FANTOM5:144.8 Scaled Tags Per Million
Pig:21.0 nTPM
Mouse:32.3 nTPM
Allen mouse:5.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA016496Antibody CAB022082
Glial cells LowNot detected
Neuronal cells MediumLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 28.1
Sample id Sample description nTPM
Hippocampus
nTPM: 26.0
1898 Male, age 80, left hemisphere 27.5
2529 Female, age 94, left hemisphere 26.1
2621 Female, age 67, right hemisphere 26.0
2148 Female, age 91, left hemisphere 25.8
1855 Male, age 76, left hemisphere 25.6
1911 Female, age 85, right hemisphere 24.9
Dentate gyrus
nTPM: 25.0
2010 Male, age 76, both hemispheres 26.8
1927 Female, age 91, both hemispheres 25.6
2528 Male, age 74, both hemispheres 25.3
2246 Female, age 85, both hemispheres 25.0
2530 Female, age 94, left hemisphere 24.2
2531 Female, age 67, both hemispheres 23.3
Entorhinal gyrus
nTPM: 27.5
1938 Female, age 85, left hemisphere 29.6
2117 Female, age 91, right hemisphere 28.3
2764 Male, age 80, right hemisphere 28.1
1787 Male, age 76, left hemisphere 27.5
2613 Female, age 94, left hemisphere 26.1
2686 Male, age 75, right hemisphere 25.1
Hippocampus, CA1
nTPM: 25.8
2749 Male, age 80, left hemisphere 29.7
2527 Male, age 74, both hemispheres 26.4
1873 Female, age 85, both hemispheres 24.9
2082 Female, age 91, right hemisphere 24.7
2045 Male, age 76, both hemispheres 23.4
Hippocampus, CA2
nTPM: 26.1
1892 Male, age 76, both hemispheres 27.7
2249 Male, age 74, both hemispheres 26.6
2437 Female, age 94, left hemisphere 26.5
1963 Male, age 80, left hemisphere 26.1
2113 Female, age 91, right hemisphere 25.0
1940 Female, age 85, left hemisphere 24.6
Hippocampus, CA3
nTPM: 25.7
2137 Male, age 80, left hemisphere 27.9
2436 Male, age 74, both hemispheres 27.0
1891 Female, age 85, both hemispheres 26.0
1867 Male, age 76, both hemispheres 25.9
2620 Female, age 94, left hemisphere 24.2
2861 Female, age 67, both hemispheres 23.3
Parahippocampal cortex
nTPM: 26.9
1850 Male, age 80, both hemispheres 30.4
1990 Female, age 91, right hemisphere 27.9
2532 Female, age 72, left hemisphere 27.5
2692 Male, age 74, both hemispheres 27.5
2693 Female, age 94, both hemispheres 27.5
2250 Female, age 67, right hemisphere 26.4
1933 Female, age 85, both hemispheres 26.3
2622 Female, age 67, right hemisphere 26.0
2245 Female, age 91, both hemispheres 25.9
2018 Male, age 76, both hemispheres 23.7
Perirhinal gyrus
nTPM: 28.1
1794 Male, age 80, right hemisphere 29.9
1841 Female, age 85, right hemisphere 28.8
1847 Female, age 91, left hemisphere 28.2
2848 Male, age 76, right hemisphere 27.0
2521 Female, age 94, right hemisphere 26.7
Subiculum
nTPM: 26.0
1901 Male, age 80, both hemispheres 27.3
2619 Male, age 74, both hemispheres 27.2
1977 Female, age 85, both hemispheres 27.1
2438 Female, age 94, left hemisphere 25.9
2042 Male, age 76, both hemispheres 24.5
2729 Female, age 91, right hemisphere 23.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 29.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 29.6
Samples: 197

Max nTPM: 38.8
Min nTPM: 17.8
Std nTPM: 3.7
Median nTPM: 29.4
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 38.8
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 37.7
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 37.7
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 37.6
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 37.3
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 37.1
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 37.0
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 36.6
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 36.3
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 36.1
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 36.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 144.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 144.8
FF:10169-103B7 60 years, female 177.8
FF:10153-102I9 76 years, female 111.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 21.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 21.0
Samples: 4

Max nTPM: 27.1
Min nTPM: 15.7
Sample A Female 27.1
Sample B Female 22.8
Sample C Male 18.3
Sample D Male 15.7
Entorhinal cortex
nTPM: 19.6
Samples: 4

Max nTPM: 23.0
Min nTPM: 16.2
Sample A Female 23.0
Sample B Female 21.1
Sample C Male 17.9
Sample D Male 16.2
Subiculum
nTPM: 17.1
Samples: 4

Max nTPM: 21.7
Min nTPM: 15.2
Sample A Female 21.7
Sample B Female 15.2
Sample C Male 16.3
Sample D Male 15.3
Ventral hippocampus
nTPM: 19.4
Samples: 4

Max nTPM: 21.6
Min nTPM: 14.4
Sample A Female 20.4
Sample B Female 14.4
Sample C Male 21.3
Sample D Male 21.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 32.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 31.8
Samples: 4

Max nTPM: 33.2
Min nTPM: 30.6
Sample A Male 31.7
Sample B Male 31.7
Sample C Female 30.6
Sample D Female 33.2
Hippocampal formation
nTPM: 32.3
Samples: 4

Max nTPM: 34.7
Min nTPM: 30.4
Sample A Male 31.4
Sample B Male 32.7
Sample C Female 34.7
Sample D Female 30.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 5.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.1
69549251 Antisense, RP_050126_01_D11, Mouse strain C57BL/6J (56 days, male) 5.1

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