HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:21.7 nTPM
HPA:21.7 nTPM
GTEx:23.2 nTPM
FANTOM5:11.7 Scaled Tags Per Million
Pig:9.8 nTPM
Mouse:14.0 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA037645Antibody HPA062118
Glial cells LowNot detected
Neuronal cells LowLow




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 21.7
Sample id Sample description nTPM
Hippocampus
nTPM: 21.7
2529 Female, age 94, left hemisphere 24.4
1911 Female, age 85, right hemisphere 22.5
1898 Male, age 80, left hemisphere 21.9
1855 Male, age 76, left hemisphere 20.8
2148 Female, age 91, left hemisphere 20.4
2621 Female, age 67, right hemisphere 20.0
Dentate gyrus
nTPM: 20.7
2530 Female, age 94, left hemisphere 23.3
2246 Female, age 85, both hemispheres 20.8
2528 Male, age 74, both hemispheres 20.8
2531 Female, age 67, both hemispheres 20.0
2010 Male, age 76, both hemispheres 19.8
1927 Female, age 91, both hemispheres 19.4
Entorhinal gyrus
nTPM: 20.1
1938 Female, age 85, left hemisphere 21.7
2117 Female, age 91, right hemisphere 21.4
1787 Male, age 76, left hemisphere 20.3
2686 Male, age 75, right hemisphere 20.2
2764 Male, age 80, right hemisphere 18.9
2613 Female, age 94, left hemisphere 18.0
Hippocampus, CA1
nTPM: 20.1
1873 Female, age 85, both hemispheres 22.1
2527 Male, age 74, both hemispheres 21.3
2082 Female, age 91, right hemisphere 20.0
2749 Male, age 80, left hemisphere 19.9
2045 Male, age 76, both hemispheres 17.4
Hippocampus, CA2
nTPM: 20.5
1963 Male, age 80, left hemisphere 21.7
1892 Male, age 76, both hemispheres 20.7
2249 Male, age 74, both hemispheres 20.7
2113 Female, age 91, right hemisphere 20.6
2437 Female, age 94, left hemisphere 20.3
1940 Female, age 85, left hemisphere 19.2
Hippocampus, CA3
nTPM: 20.5
2861 Female, age 67, both hemispheres 23.1
1891 Female, age 85, both hemispheres 20.7
1867 Male, age 76, both hemispheres 20.2
2436 Male, age 74, both hemispheres 19.9
2620 Female, age 94, left hemisphere 19.6
2137 Male, age 80, left hemisphere 19.3
Parahippocampal cortex
nTPM: 19.9
2532 Female, age 72, left hemisphere 21.8
1933 Female, age 85, both hemispheres 21.0
2692 Male, age 74, both hemispheres 20.9
1850 Male, age 80, both hemispheres 20.8
2245 Female, age 91, both hemispheres 20.8
2622 Female, age 67, right hemisphere 19.9
2250 Female, age 67, right hemisphere 19.1
2018 Male, age 76, both hemispheres 18.8
1990 Female, age 91, right hemisphere 18.6
2693 Female, age 94, both hemispheres 17.5
Perirhinal gyrus
nTPM: 19.7
1841 Female, age 85, right hemisphere 20.2
2848 Male, age 76, right hemisphere 20.1
1794 Male, age 80, right hemisphere 20.0
1847 Female, age 91, left hemisphere 19.7
2521 Female, age 94, right hemisphere 18.5
Subiculum
nTPM: 19.8
2729 Female, age 91, right hemisphere 22.5
1977 Female, age 85, both hemispheres 20.4
1901 Male, age 80, both hemispheres 20.2
2438 Female, age 94, left hemisphere 19.6
2619 Male, age 74, both hemispheres 19.1
2042 Male, age 76, both hemispheres 16.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 23.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 23.2
Samples: 197

Max nTPM: 37.2
Min nTPM: 8.4
Std nTPM: 4.1
Median nTPM: 22.9
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 37.2
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 34.5
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 33.8
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 32.8
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 32.7
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 32.7
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 32.0
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 31.9
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 31.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 30.7
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 30.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 11.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 11.7
FF:10153-102I9 76 years, female 12.9
FF:10169-103B7 60 years, female 10.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 9.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 8.8
Samples: 4

Max nTPM: 10.0
Min nTPM: 7.6
Sample A Female 10.0
Sample B Female 8.6
Sample C Male 9.1
Sample D Male 7.6
Entorhinal cortex
nTPM: 8.7
Samples: 4

Max nTPM: 9.7
Min nTPM: 7.2
Sample A Female 8.6
Sample B Female 9.2
Sample C Male 9.7
Sample D Male 7.2
Subiculum
nTPM: 9.8
Samples: 4

Max nTPM: 11.8
Min nTPM: 8.7
Sample A Female 11.8
Sample B Female 9.4
Sample C Male 9.3
Sample D Male 8.7
Ventral hippocampus
nTPM: 9.3
Samples: 4

Max nTPM: 11.0
Min nTPM: 8.0
Sample A Female 9.5
Sample B Female 8.0
Sample C Male 11.0
Sample D Male 8.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 14.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 12.9
Samples: 4

Max nTPM: 13.2
Min nTPM: 12.5
Sample A Male 12.5
Sample B Male 12.9
Sample C Female 13.2
Sample D Female 13.1
Hippocampal formation
nTPM: 14.0
Samples: 4

Max nTPM: 15.0
Min nTPM: 12.8
Sample A Male 14.0
Sample B Male 12.8
Sample C Female 15.0
Sample D Female 14.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
69873528 Antisense, RP_050512_01_E01, Mouse strain C57BL/6J (56 days, male) 0.1

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