HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:8.0 nTPM
HPA:8.0 nTPM
GTEx:14.4 nTPM
FANTOM5:19.8 Scaled Tags Per Million
Pig:19.2 nTPM
Mouse:39.8 nTPM
Allen mouse:7.3 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 8.0
Sample id Sample description nTPM
Hippocampus
nTPM: 6.1
2148 Female, age 91, left hemisphere 13.2
1855 Male, age 76, left hemisphere 7.5
1898 Male, age 80, left hemisphere 7.4
2621 Female, age 67, right hemisphere 5.0
2529 Female, age 94, left hemisphere 2.9
1911 Female, age 85, right hemisphere 0.3
Dentate gyrus
nTPM: 8.0
1927 Female, age 91, both hemispheres 20.2
2530 Female, age 94, left hemisphere 8.5
2010 Male, age 76, both hemispheres 6.2
2528 Male, age 74, both hemispheres 5.2
2531 Female, age 67, both hemispheres 4.5
2246 Female, age 85, both hemispheres 3.4
Entorhinal gyrus
nTPM: 3.9
2613 Female, age 94, left hemisphere 12.2
2686 Male, age 75, right hemisphere 6.9
2764 Male, age 80, right hemisphere 4.3
2117 Female, age 91, right hemisphere 0.2
1787 Male, age 76, left hemisphere 0.0
1938 Female, age 85, left hemisphere 0.0
Hippocampus, CA1
nTPM: 7.6
2749 Male, age 80, left hemisphere 12.6
2045 Male, age 76, both hemispheres 9.7
2082 Female, age 91, right hemisphere 6.6
1873 Female, age 85, both hemispheres 6.4
2527 Male, age 74, both hemispheres 2.6
Hippocampus, CA2
nTPM: 7.4
1892 Male, age 76, both hemispheres 24.3
1963 Male, age 80, left hemisphere 8.3
2437 Female, age 94, left hemisphere 6.3
1940 Female, age 85, left hemisphere 2.5
2113 Female, age 91, right hemisphere 2.5
2249 Male, age 74, both hemispheres 0.5
Hippocampus, CA3
nTPM: 7.2
2620 Female, age 94, left hemisphere 18.6
1867 Male, age 76, both hemispheres 8.5
2861 Female, age 67, both hemispheres 8.2
2137 Male, age 80, left hemisphere 6.8
1891 Female, age 85, both hemispheres 0.6
2436 Male, age 74, both hemispheres 0.2
Parahippocampal cortex
nTPM: 3.7
2693 Female, age 94, both hemispheres 6.9
2245 Female, age 91, both hemispheres 6.4
2250 Female, age 67, right hemisphere 6.1
2622 Female, age 67, right hemisphere 5.6
1990 Female, age 91, right hemisphere 3.5
1850 Male, age 80, both hemispheres 3.4
2018 Male, age 76, both hemispheres 3.0
2532 Female, age 72, left hemisphere 1.0
2692 Male, age 74, both hemispheres 0.9
1933 Female, age 85, both hemispheres 0.5
Perirhinal gyrus
nTPM: 5.2
2521 Female, age 94, right hemisphere 9.7
1847 Female, age 91, left hemisphere 8.3
1794 Male, age 80, right hemisphere 6.7
1841 Female, age 85, right hemisphere 1.5
2848 Male, age 76, right hemisphere 0.0
Subiculum
nTPM: 3.0
2438 Female, age 94, left hemisphere 6.7
1901 Male, age 80, both hemispheres 4.3
2729 Female, age 91, right hemisphere 2.7
2619 Male, age 74, both hemispheres 2.6
1977 Female, age 85, both hemispheres 2.1
2042 Male, age 76, both hemispheres 0.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 14.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 14.4
Samples: 197

Max nTPM: 42.9
Min nTPM: 3.4
Std nTPM: 7.1
Median nTPM: 13.2
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 42.9
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 38.1
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 36.2
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 35.6
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 34.2
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 32.9
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 32.4
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 30.6
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 30.3
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 29.7
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 27.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 19.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 19.8
FF:10169-103B7 60 years, female 25.1
FF:10153-102I9 76 years, female 14.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 19.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 14.0
Samples: 4

Max nTPM: 17.3
Min nTPM: 9.9
Sample A Female 15.0
Sample B Female 17.3
Sample C Male 13.8
Sample D Male 9.9
Entorhinal cortex
nTPM: 16.9
Samples: 4

Max nTPM: 21.0
Min nTPM: 12.5
Sample A Female 18.8
Sample B Female 12.5
Sample C Male 21.0
Sample D Male 15.4
Subiculum
nTPM: 19.3
Samples: 4

Max nTPM: 23.4
Min nTPM: 14.4
Sample A Female 23.4
Sample B Female 17.2
Sample C Male 22.0
Sample D Male 14.4
Ventral hippocampus
nTPM: 18.1
Samples: 4

Max nTPM: 26.0
Min nTPM: 12.3
Sample A Female 13.4
Sample B Female 12.3
Sample C Male 26.0
Sample D Male 20.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 39.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 36.8
Samples: 4

Max nTPM: 43.8
Min nTPM: 33.2
Sample A Male 36.8
Sample B Male 33.2
Sample C Female 33.2
Sample D Female 43.8
Hippocampal formation
nTPM: 39.8
Samples: 4

Max nTPM: 44.2
Min nTPM: 33.8
Sample A Male 33.8
Sample B Male 41.3
Sample C Female 39.9
Sample D Female 44.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 7.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 7.3
68924841 Antisense, RP_050309_01_B04, Mouse strain C57BL/6J (56 days, male) 7.3
70301082 Antisense, RP_050309_01_B04, Mouse strain C57BL/6J (56 days, male) 3.6

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