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TISSUE PRIMARY DATA VAGINA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN ORAL MUCOSA OVARY
PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE
SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Vagina
Tissue proteome
Vagina
VAGINA - Expression summary
Protein expression
Vaginai

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Squamous epithelial cells: Not detected
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:238.1 nTPM
GTEx:238.1 nTPM
FANTOM5:658.1 Scaled Tags Per Million

VAGINA - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA001939Antibody CAB002788
Squamous epithelial cells LowNot detected





VAGINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 238.1
GTEx sample id Sample description nTPM
Vagina
Average nTPM: 238.1
Samples: 156

Max nTPM: 970.0
Min nTPM: 28.1
Std nTPM: 161.0
Median nTPM: 203.6
GTEX-PLZ4-2726-SM-3P61A 50-59 years, female 970.0
GTEX-ZYVF-0326-SM-5GIES 50-59 years, female 867.2
GTEX-13OVI-0926-SM-5J1MI 60-69 years, female 740.7
GTEX-1GN1U-2426-SM-9KNTU 50-59 years, female 688.7
GTEX-14H4A-2426-SM-664OQ 40-49 years, female 643.9
GTEX-12WSJ-1326-SM-5GCOB 40-49 years, female 640.0
GTEX-X8HC-2826-SM-46MWJ 50-59 years, female 575.9
GTEX-1S5ZU-2626-SM-E9TII 20-29 years, female 568.6
GTEX-1LNCM-1026-SM-E9U5D 50-59 years, female 540.1
GTEX-15UF6-2126-SM-6M46Z 70-79 years, female 532.6
GTEX-TSE9-2526-SM-4DXUS 60-69 years, female 511.9
GTEX-1F48J-2526-SM-7P8TU 50-59 years, female 508.5
GTEX-12ZZX-1926-SM-5EGKC 40-49 years, female 497.0
GTEX-12WSD-2926-SM-5LZUH 60-69 years, female 466.2
GTEX-1I4MK-1726-SM-ARL7O 50-59 years, female 455.1
GTEX-XUZC-1226-SM-4BRVJ 30-39 years, female 429.6
GTEX-WRHU-2926-SM-4MVNQ 50-59 years, female 424.6
GTEX-TMMY-1926-SM-4DXUU 40-49 years, female 416.3
GTEX-183WM-2126-SM-7LG4I 70-79 years, female 402.9
GTEX-18D9A-1026-SM-7KFRU 30-39 years, female 394.4
GTEX-QCQG-1226-SM-48U23 50-59 years, female 380.7
GTEX-11DXX-1726-SM-5H11T 60-69 years, female 378.4
GTEX-13QIC-1826-SM-5J1MY 60-69 years, female 375.6
GTEX-W5WG-1026-SM-4LMIF 50-59 years, female 366.0
GTEX-11EM3-1826-SM-5A5KO 20-29 years, female 349.6
GTEX-ZVT3-2726-SM-5GU5X 60-69 years, female 349.6
GTEX-13U4I-2026-SM-5LU3L 40-49 years, female 345.6
GTEX-ZAK1-2426-SM-EXOHM 50-59 years, female 344.2
GTEX-OHPN-2426-SM-E9TI5 60-69 years, female 341.3
GTEX-1C475-0526-SM-793AC 40-49 years, female 328.8
GTEX-1HBPM-2726-SM-9WYUA 60-69 years, female 327.6
GTEX-1PIEJ-1926-SM-EVYB7 20-29 years, female 323.0
GTEX-16NGA-1626-SM-72D6M 40-49 years, female 319.3
GTEX-YJ8O-1226-SM-5P9JE 40-49 years, female 317.6
GTEX-1QPFJ-1626-SM-DTX7X 30-39 years, female 316.2
GTEX-15DYW-2926-SM-6PANA 60-69 years, female 313.9
GTEX-P78B-2226-SM-3P5ZZ 40-49 years, female 313.0
GTEX-14BMU-1926-SM-5S2QC 20-29 years, female 310.0
GTEX-15ER7-2526-SM-7KUFW 20-29 years, female 308.2
GTEX-ZYY3-2626-SM-5N9DH 60-69 years, female 305.7
GTEX-PWCY-1726-SM-48TD3 20-29 years, female 299.9
GTEX-113JC-1926-SM-5N9GE 50-59 years, female 299.1
GTEX-145LS-2526-SM-5TDC9 60-69 years, female 297.0
GTEX-S4UY-1326-SM-4AD4X 40-49 years, female 294.3
GTEX-14JG6-0726-SM-69LQH 30-39 years, female 293.4
GTEX-17JCI-2526-SM-7DHLB 60-69 years, female 285.5
GTEX-T2IS-1926-SM-4DM74 20-29 years, female 284.0
GTEX-XV7Q-1626-SM-4BRWC 40-49 years, female 283.7
GTEX-1EWIQ-2326-SM-7IGNF 70-79 years, female 282.2
GTEX-QDT8-2526-SM-48TYX 30-39 years, female 280.7
GTEX-1HBPH-2926-SM-9WPNX 40-49 years, female 271.7
GTEX-WEY5-0826-SM-4LMIH 40-49 years, female 269.4
GTEX-1JN1M-2326-SM-ARZNG 60-69 years, female 267.1
GTEX-17F9Y-2326-SM-7DUFP 70-79 years, female 264.3
GTEX-146FR-2426-SM-5NQAU 60-69 years, female 260.7
GTEX-RWS6-1726-SM-47JXP 60-69 years, female 258.8
GTEX-13W3W-2326-SM-5LU4Y 60-69 years, female 254.9
GTEX-13PVR-1426-SM-5S2PW 60-69 years, female 254.2
GTEX-11P81-2126-SM-5HL6N 30-39 years, female 252.7
GTEX-YFC4-2926-SM-5IFJ8 40-49 years, female 247.7
GTEX-WYVS-1426-SM-4ONCV 40-49 years, female 246.7
GTEX-ZVT2-0626-SM-5GICR 50-59 years, female 246.7
GTEX-RU1J-1426-SM-46MUV 20-29 years, female 242.2
GTEX-Y114-1926-SM-4TT8J 50-59 years, female 242.2
GTEX-OHPL-2526-SM-3MJGT 60-69 years, female 233.8
GTEX-1LH75-1726-SM-DHXKZ 50-59 years, female 232.3
GTEX-1LGRB-2126-SM-COH48 50-59 years, female 230.4
GTEX-UJHI-1326-SM-4IHJO 50-59 years, female 228.6
GTEX-1GMR8-2526-SM-7RHI9 50-59 years, female 227.6
GTEX-13D11-1326-SM-5IJFY 50-59 years, female 224.3
GTEX-S4P3-1126-SM-4AD52 50-59 years, female 221.0
GTEX-QVJO-2526-SM-CYPRA 60-69 years, female 217.7
GTEX-1IE54-2626-SM-CMKFY 40-49 years, female 216.3
GTEX-U3ZN-0926-SM-4DXTU 30-39 years, female 213.6
GTEX-16NPV-2526-SM-6M483 50-59 years, female 213.1
GTEX-131XG-2126-SM-5DUXG 50-59 years, female 212.8
GTEX-PWN1-2526-SM-48TDS 40-49 years, female 210.2
GTEX-TML8-1126-SM-4DXSS 40-49 years, female 204.5
GTEX-ZTPG-2226-SM-57WF9 20-29 years, female 202.7
GTEX-14A5I-2726-SM-5SIB3 50-59 years, female 202.0
GTEX-NPJ7-2526-SM-EV79A 60-69 years, female 199.6
GTEX-ZV6S-1326-SM-59HJA 40-49 years, female 195.2
GTEX-11GSP-2226-SM-5HL5Q 60-69 years, female 193.8
GTEX-1I1GT-1226-SM-B2LVK 60-69 years, female 193.6
GTEX-ZP4G-0826-SM-4WWF3 20-29 years, female 191.7
GTEX-145ME-1426-SM-5RQJS 40-49 years, female 185.7
GTEX-1HCU8-2026-SM-9YFLE 60-69 years, female 184.9
GTEX-14AS3-1726-SM-5RQJV 40-49 years, female 183.7
GTEX-131YS-2426-SM-5J2OD 60-69 years, female 183.4
GTEX-14PJ6-1626-SM-6872D 60-69 years, female 180.2
GTEX-ZQG8-1126-SM-51MRL 60-69 years, female 180.2
GTEX-X15G-1926-SM-4PQZQ 50-59 years, female 177.4
GTEX-1ICG6-1626-SM-ARL81 70-79 years, female 175.6
GTEX-147F3-1526-SM-5SIAK 50-59 years, female 175.4
GTEX-ZGAY-2226-SM-4YCCX 40-49 years, female 174.8
GTEX-T6MO-1226-SM-4DM5S 40-49 years, female 170.3
GTEX-1J1OQ-1826-SM-CL53R 40-49 years, female 168.2
GTEX-14PJM-2926-SM-69LOE 50-59 years, female 167.7
GTEX-Y3IK-2226-SM-4YCD4 50-59 years, female 164.7
GTEX-1LGOU-1126-SM-D3LAI 20-29 years, female 163.9
GTEX-PX3G-2526-SM-48TZV 20-29 years, female 162.8
GTEX-OHPK-2526-SM-3MJH9 50-59 years, female 160.5
GTEX-13QBU-1726-SM-5IJFQ 40-49 years, female 156.6
GTEX-1NUQO-1826-SM-E6CQU 20-29 years, female 155.0
GTEX-14DAQ-2326-SM-5S2QX 60-69 years, female 147.2
GTEX-1HCU6-2326-SM-ACKXP 60-69 years, female 146.0
GTEX-1HCUA-1026-SM-A9SMI 50-59 years, female 145.4
GTEX-1R9JW-1426-SM-DTX9K 30-39 years, female 145.2
GTEX-146FH-2626-SM-5Q5E1 50-59 years, female 142.9
GTEX-1MCC2-1126-SM-EVYD6 30-39 years, female 141.0
GTEX-1AMFI-1526-SM-73KVY 50-59 years, female 138.4
GTEX-15SB6-1426-SM-7KUEM 50-59 years, female 132.6
GTEX-ZE7O-2426-SM-57WD7 50-59 years, female 129.2
GTEX-1GN1W-1526-SM-7P8TG 50-59 years, female 128.5
GTEX-1F5PL-1826-SM-7P8PP 40-49 years, female 125.0
GTEX-XUW1-0326-SM-4BOOR 50-59 years, female 123.0
GTEX-18A7A-2826-SM-7LT8J 50-59 years, female 122.9
GTEX-13N11-1526-SM-5L3FL 50-59 years, female 122.3
GTEX-1QP28-1426-SM-EVR4E 50-59 years, female 121.1
GTEX-14PKU-1326-SM-6871B 40-49 years, female 116.2
GTEX-1QCLZ-2226-SM-DTX7R 60-69 years, female 114.6
GTEX-Y8LW-1426-SM-5RQJJ 50-59 years, female 113.8
GTEX-1A8FM-2426-SM-7IGPE 50-59 years, female 112.3
GTEX-ZLWG-1126-SM-4WWFQ 50-59 years, female 110.5
GTEX-13PL7-2726-SM-5L3GB 60-69 years, female 107.9
GTEX-1LVAM-1926-SM-E6CIM 50-59 years, female 107.9
GTEX-SN8G-2626-SM-EXUQT 50-59 years, female 101.5
GTEX-1LVAN-1626-SM-CNPQ7 50-59 years, female 99.1
GTEX-11XUK-1326-SM-5EQM4 40-49 years, female 96.6
GTEX-11VI4-0726-SM-5GU5B 40-49 years, female 95.8
GTEX-P4PP-2526-SM-3P61P 30-39 years, female 94.4
GTEX-1JMQL-2326-SM-CNNPV 50-59 years, female 93.6
GTEX-1399S-2326-SM-5K7YV 30-39 years, female 93.0
GTEX-14PN3-1626-SM-6AJAV 60-69 years, female 92.9
GTEX-SE5C-1126-SM-4BRWZ 40-49 years, female 87.4
GTEX-ZXES-0626-SM-5E45P 30-39 years, female 86.7
GTEX-Q734-1426-SM-DTXFX 40-49 years, female 86.0
GTEX-1CAMS-2326-SM-793CR 40-49 years, female 85.3
GTEX-ZC5H-2226-SM-4WAWS 40-49 years, female 80.0
GTEX-11EMC-1926-SM-5A5JU 60-69 years, female 77.6
GTEX-15SDE-1726-SM-6LPJS 50-59 years, female 76.9
GTEX-1J8EW-2526-SM-CKZO2 60-69 years, female 76.6
GTEX-15SHU-2926-SM-7KUKT 40-49 years, female 73.6
GTEX-N7MT-1926-SM-3LK5N 60-69 years, female 72.4
GTEX-1399U-1526-SM-5J2N7 50-59 years, female 71.5
GTEX-1HFI7-1126-SM-A96S5 50-59 years, female 65.2
GTEX-S7SF-1426-SM-4AT5A 20-29 years, female 61.4
GTEX-1117F-2526-SM-5GZY6 60-69 years, female 57.2
GTEX-1GF9U-1926-SM-7P8TZ 40-49 years, female 53.1
GTEX-11TTK-2726-SM-5GU58 60-69 years, female 48.0
GTEX-1IDJU-1026-SM-AHZ2U 60-69 years, female 47.2
GTEX-1JN76-1526-SM-CNPPF 20-29 years, female 35.9
GTEX-1MCYP-1326-SM-EV7AD 20-29 years, female 35.7
GTEX-ZZPU-2226-SM-5EGIV 50-59 years, female 35.4
GTEX-S341-1226-SM-4AD5S 40-49 years, female 35.1
GTEX-11I78-2026-SM-5987C 50-59 years, female 28.1
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VAGINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 658.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Vagina
Scaled Tags Per Million: 658.1
FF:10204-103F6 68 years, female 658.1

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