HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Not detected
Mouse brain, Intensity
Hippocampal formationi 		29.910
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:4.8 nTPM
HPA:4.8 nTPM
GTEx:4.5 nTPM
FANTOM5:30.0 Scaled Tags Per Million
Pig:9.6 nTPM
Mouse:6.4 nTPM
Allen mouse:1.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA007891
Glial cells Low
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - Mouse brain profilei , antibody HPA008433
Hippocampal formation mean intensity 29.910
intensityi
FRONT BACK
Polymorph layer of the dentate gyrus 22.610
Molecular layer of the dentate gyrus 29.910
Granular dentate gyrus 29.590
CA1 - oriens layer 21.880
CA1 - pyramidal layer 12.270
CA1 - radiatum layer 22.430
CA2 - oriens layer 18.680
CA2 - pyramidal layer 12.490
CA2 - radiatum layer 21.290
CA3 - oriens layer 24.660
CA3 - pyramidal layer 19.660
CA3 - radiatum layer 29.370
Stratum lucidum 16.940
Lacunosum moleculare 24.510
Subiculum -

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 4.8
Sample id Sample description nTPM
Hippocampus
nTPM: 4.8
1855 Male, age 76, left hemisphere 6.3
1898 Male, age 80, left hemisphere 6.3
1911 Female, age 85, right hemisphere 5.2
2621 Female, age 67, right hemisphere 4.8
2148 Female, age 91, left hemisphere 3.5
2529 Female, age 94, left hemisphere 3.0
Dentate gyrus
nTPM: 3.6
2010 Male, age 76, both hemispheres 4.6
2528 Male, age 74, both hemispheres 4.1
2530 Female, age 94, left hemisphere 3.9
2246 Female, age 85, both hemispheres 3.7
1927 Female, age 91, both hemispheres 3.1
2531 Female, age 67, both hemispheres 2.3
Entorhinal gyrus
nTPM: 2.9
2117 Female, age 91, right hemisphere 4.9
1787 Male, age 76, left hemisphere 4.0
1938 Female, age 85, left hemisphere 3.1
2764 Male, age 80, right hemisphere 2.3
2613 Female, age 94, left hemisphere 2.1
2686 Male, age 75, right hemisphere 1.3
Hippocampus, CA1
nTPM: 3.7
2082 Female, age 91, right hemisphere 4.6
1873 Female, age 85, both hemispheres 4.5
2045 Male, age 76, both hemispheres 4.1
2749 Male, age 80, left hemisphere 2.8
2527 Male, age 74, both hemispheres 2.5
Hippocampus, CA2
nTPM: 4.5
1940 Female, age 85, left hemisphere 6.5
1892 Male, age 76, both hemispheres 4.7
2113 Female, age 91, right hemisphere 4.5
2249 Male, age 74, both hemispheres 4.2
1963 Male, age 80, left hemisphere 3.7
2437 Female, age 94, left hemisphere 3.0
Hippocampus, CA3
nTPM: 3.1
1867 Male, age 76, both hemispheres 4.4
1891 Female, age 85, both hemispheres 4.4
2436 Male, age 74, both hemispheres 3.8
2861 Female, age 67, both hemispheres 2.5
2137 Male, age 80, left hemisphere 2.4
2620 Female, age 94, left hemisphere 0.8
Parahippocampal cortex
nTPM: 3.3
2250 Female, age 67, right hemisphere 6.0
2018 Male, age 76, both hemispheres 5.3
2693 Female, age 94, both hemispheres 3.7
2532 Female, age 72, left hemisphere 3.3
1850 Male, age 80, both hemispheres 3.0
1933 Female, age 85, both hemispheres 2.8
1990 Female, age 91, right hemisphere 2.8
2245 Female, age 91, both hemispheres 2.6
2692 Male, age 74, both hemispheres 2.3
2622 Female, age 67, right hemisphere 0.8
Perirhinal gyrus
nTPM: 3.2
2521 Female, age 94, right hemisphere 4.3
2848 Male, age 76, right hemisphere 3.6
1794 Male, age 80, right hemisphere 2.9
1841 Female, age 85, right hemisphere 2.8
1847 Female, age 91, left hemisphere 2.4
Subiculum
nTPM: 4.5
2042 Male, age 76, both hemispheres 6.6
2729 Female, age 91, right hemisphere 6.3
1901 Male, age 80, both hemispheres 4.6
2619 Male, age 74, both hemispheres 4.1
1977 Female, age 85, both hemispheres 3.4
2438 Female, age 94, left hemisphere 2.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 4.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 4.5
Samples: 197

Max nTPM: 12.5
Min nTPM: 0.7
Std nTPM: 2.5
Median nTPM: 4.0
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 12.5
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 11.1
GTEX-1H3O1-0011-R1b-SM-CL554 60-69 years, male 11.0
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 10.9
GTEX-17EVQ-0011-R1a-SM-7189S 70-79 years, male 10.9
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 10.5
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 10.5
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 10.3
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 10.2
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 10.1
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 9.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 30.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 30.0
FF:10153-102I9 76 years, female 50.6
FF:10169-103B7 60 years, female 9.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 9.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 8.3
Samples: 4

Max nTPM: 10.4
Min nTPM: 6.0
Sample A Female 9.6
Sample B Female 6.0
Sample C Male 10.4
Sample D Male 7.3
Entorhinal cortex
nTPM: 6.9
Samples: 4

Max nTPM: 8.1
Min nTPM: 6.0
Sample A Female 6.9
Sample B Female 6.0
Sample C Male 8.1
Sample D Male 6.6
Subiculum
nTPM: 9.6
Samples: 4

Max nTPM: 11.4
Min nTPM: 8.3
Sample A Female 11.4
Sample B Female 8.3
Sample C Male 9.9
Sample D Male 8.8
Ventral hippocampus
nTPM: 8.0
Samples: 4

Max nTPM: 8.5
Min nTPM: 7.5
Sample A Female 7.5
Sample B Female 7.9
Sample C Male 8.5
Sample D Male 7.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 6.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 6.4
Samples: 4

Max nTPM: 7.3
Min nTPM: 5.7
Sample A Male 6.6
Sample B Male 7.3
Sample C Female 6.1
Sample D Female 5.7
Hippocampal formation
nTPM: 5.7
Samples: 4

Max nTPM: 6.9
Min nTPM: 5.0
Sample A Male 5.5
Sample B Male 6.9
Sample C Female 5.0
Sample D Female 5.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.1
70305251 Antisense, RP_050609_03_F06, Mouse strain C57BL/6J (56 days, male) 1.1

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