HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:101.9 nTPM
HPA:101.9 nTPM
GTEx:107.0 nTPM
FANTOM5:505.9 Scaled Tags Per Million
Pig:227.6 nTPM
Mouse:389.4 nTPM
Allen mouse:12.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA040878Antibody CAB008387
Glial cells Not detectedNot detected
Neuronal cells LowMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 101.9
Sample id Sample description nTPM
Hippocampus
nTPM: 75.0
2529 Female, age 94, left hemisphere 92.1
1898 Male, age 80, left hemisphere 80.0
2621 Female, age 67, right hemisphere 79.4
1855 Male, age 76, left hemisphere 77.1
1911 Female, age 85, right hemisphere 65.0
2148 Female, age 91, left hemisphere 56.5
Dentate gyrus
nTPM: 71.6
2530 Female, age 94, left hemisphere 109.4
2010 Male, age 76, both hemispheres 83.4
2246 Female, age 85, both hemispheres 81.9
1927 Female, age 91, both hemispheres 57.4
2528 Male, age 74, both hemispheres 48.9
2531 Female, age 67, both hemispheres 48.8
Entorhinal gyrus
nTPM: 101.9
2117 Female, age 91, right hemisphere 110.3
2613 Female, age 94, left hemisphere 109.7
2764 Male, age 80, right hemisphere 108.5
1787 Male, age 76, left hemisphere 94.9
2686 Male, age 75, right hemisphere 94.3
1938 Female, age 85, left hemisphere 93.6
Hippocampus, CA1
nTPM: 82.5
2749 Male, age 80, left hemisphere 131.0
2527 Male, age 74, both hemispheres 87.6
1873 Female, age 85, both hemispheres 81.1
2082 Female, age 91, right hemisphere 61.4
2045 Male, age 76, both hemispheres 51.6
Hippocampus, CA2
nTPM: 83.4
1892 Male, age 76, both hemispheres 103.6
1963 Male, age 80, left hemisphere 98.9
2437 Female, age 94, left hemisphere 89.9
1940 Female, age 85, left hemisphere 79.6
2113 Female, age 91, right hemisphere 69.5
2249 Male, age 74, both hemispheres 58.8
Hippocampus, CA3
nTPM: 72.3
2137 Male, age 80, left hemisphere 102.3
1867 Male, age 76, both hemispheres 78.7
2620 Female, age 94, left hemisphere 78.2
1891 Female, age 85, both hemispheres 71.3
2861 Female, age 67, both hemispheres 65.7
2436 Male, age 74, both hemispheres 37.5
Parahippocampal cortex
nTPM: 95.7
2622 Female, age 67, right hemisphere 120.3
2692 Male, age 74, both hemispheres 119.1
2245 Female, age 91, both hemispheres 105.1
1850 Male, age 80, both hemispheres 100.0
2532 Female, age 72, left hemisphere 97.7
1990 Female, age 91, right hemisphere 93.7
1933 Female, age 85, both hemispheres 90.8
2250 Female, age 67, right hemisphere 77.6
2693 Female, age 94, both hemispheres 76.4
2018 Male, age 76, both hemispheres 76.0
Perirhinal gyrus
nTPM: 88.7
1794 Male, age 80, right hemisphere 98.3
1841 Female, age 85, right hemisphere 92.8
1847 Female, age 91, left hemisphere 88.1
2848 Male, age 76, right hemisphere 84.9
2521 Female, age 94, right hemisphere 79.3
Subiculum
nTPM: 91.2
2619 Male, age 74, both hemispheres 112.4
2438 Female, age 94, left hemisphere 108.4
1901 Male, age 80, both hemispheres 105.5
2042 Male, age 76, both hemispheres 88.1
1977 Female, age 85, both hemispheres 87.7
2729 Female, age 91, right hemisphere 44.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 107.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 107.0
Samples: 197

Max nTPM: 195.5
Min nTPM: 18.9
Std nTPM: 26.9
Median nTPM: 104.6
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 195.5
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 186.2
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 175.6
GTEX-1B8SF-0011-R1b-SM-7P8Q8 60-69 years, male 175.4
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 172.9
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 161.5
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 160.7
GTEX-1A8G6-0011-R1a-SM-7P8PC 60-69 years, male 160.3
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 160.3
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 156.7
GTEX-17HHY-0011-R1a-SM-7189V 50-59 years, male 153.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 505.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 505.9
FF:10169-103B7 60 years, female 535.7
FF:10153-102I9 76 years, female 476.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 227.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 227.6
Samples: 4

Max nTPM: 301.9
Min nTPM: 176.4
Sample A Female 301.9
Sample B Female 233.8
Sample C Male 198.4
Sample D Male 176.4
Entorhinal cortex
nTPM: 219.1
Samples: 4

Max nTPM: 253.6
Min nTPM: 198.1
Sample A Female 253.6
Sample B Female 198.1
Sample C Male 224.1
Sample D Male 200.4
Subiculum
nTPM: 223.3
Samples: 4

Max nTPM: 278.1
Min nTPM: 194.8
Sample A Female 278.1
Sample B Female 201.5
Sample C Male 218.7
Sample D Male 194.8
Ventral hippocampus
nTPM: 209.2
Samples: 4

Max nTPM: 241.5
Min nTPM: 148.0
Sample A Female 221.7
Sample B Female 148.0
Sample C Male 241.5
Sample D Male 225.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 389.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 389.4
Samples: 4

Max nTPM: 466.5
Min nTPM: 351.3
Sample A Male 378.5
Sample B Male 361.2
Sample C Female 351.3
Sample D Female 466.5
Hippocampal formation
nTPM: 355.5
Samples: 4

Max nTPM: 391.8
Min nTPM: 319.3
Sample A Male 340.3
Sample B Male 370.7
Sample C Female 391.8
Sample D Female 319.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 12.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 12.4
72081553 Antisense, RP_051017_01_D06, Mouse strain C57BL/6J (56 days, male) 21.1
507 Antisense, RP_Baylor_102822, Mouse strain C57BL/6J (56 days, male) 3.7
506 Antisense, RP_Baylor_102822, Mouse strain C57BL/6J (56 days, male) 2.7

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The Human Protein Atlas

The Human Protein Atlas project is funded
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