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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Low
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:112.0 nTPM
FANTOM5:144.6 Scaled Tags Per Million
Pig:88.0 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA035873Antibody HPA035874Antibody CAB009794
Glial cells LowNot detectedNot detected
Neuronal cells Not detectedNot detectedNot detected







CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 112.0
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 112.0
Samples: 246

Max nTPM: 154.5
Min nTPM: 76.0
Std nTPM: 14.8
Median nTPM: 111.6
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 154.5
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 154.0
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 148.9
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 148.8
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 146.3
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 145.7
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 144.6
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 144.0
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 143.1
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 142.2
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 142.0
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 140.1
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 139.8
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 139.4
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 137.4
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 135.9
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 135.7
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 134.1
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 134.0
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 133.7
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 133.5
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 132.7
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 132.3
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 131.6
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 131.5
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 131.1
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 131.0
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 130.7
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 130.6
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 130.5
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 130.0
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 129.8
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 129.6
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 129.4
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 128.7
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 128.4
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 128.1
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 128.0
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 127.0
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 127.0
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 126.2
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 126.1
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 126.0
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 125.5
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 125.3
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 125.1
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 124.9
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 124.8
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 124.2
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 124.1
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 123.9
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 123.4
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 123.3
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 123.2
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 123.0
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 122.8
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 122.4
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 122.0
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 121.9
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 121.6
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 121.5
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 121.3
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 121.0
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 121.0
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 120.6
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 120.1
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 120.1
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 120.0
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 119.9
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 119.8
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 119.3
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 119.2
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 119.0
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 118.9
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 118.4
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 118.0
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 118.0
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 118.0
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 118.0
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 117.7
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 117.5
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 116.9
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 116.6
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 116.3
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 115.7
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 115.7
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 115.5
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 115.3
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 115.3
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 115.2
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 115.2
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 115.2
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 115.1
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 115.1
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 114.9
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 114.7
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 114.6
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 114.5
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 114.4
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 114.4
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 114.1
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 114.1
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 114.1
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 114.0
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 114.0
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 113.9
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 113.9
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 113.6
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 113.6
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 113.5
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 113.4
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 113.2
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 113.0
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 113.0
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 112.9
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 112.8
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 112.1
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 112.0
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 111.9
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 111.9
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 111.9
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 111.9
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 111.7
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 111.5
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 111.3
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 110.3
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 110.2
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 110.2
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 110.1
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 109.8
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 109.6
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 109.4
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 109.3
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 109.1
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 109.1
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 109.0
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 108.9
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 108.8
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 108.6
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 108.6
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 108.6
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 108.5
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 108.5
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 108.4
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 108.1
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 108.0
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 108.0
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 108.0
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 107.9
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 107.8
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 107.1
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 106.8
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 106.8
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 106.7
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 106.1
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 106.1
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 106.0
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 105.6
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 105.3
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 104.4
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 104.3
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 104.3
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 104.2
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 104.2
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 104.1
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 104.0
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 103.9
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 103.9
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 103.8
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 103.7
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 103.7
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 103.7
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 103.4
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 103.3
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 103.2
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 103.2
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 103.1
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 103.0
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 103.0
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 102.9
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 102.9
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 102.8
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 102.8
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 102.3
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 102.3
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 102.2
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 102.1
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 101.8
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 101.7
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 101.7
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 101.7
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 101.5
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 101.5
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 101.2
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 101.0
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 101.0
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 100.9
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 100.7
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 100.4
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 100.4
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 100.3
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 99.9
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 98.8
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 98.7
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 98.6
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 98.5
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 97.7
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 97.4
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 97.4
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 96.7
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 96.4
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 96.0
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 95.9
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 95.8
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 95.7
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 95.4
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 95.4
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 95.1
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 95.1
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 94.9
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 94.5
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 94.2
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 94.1
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 93.8
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 93.4
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 92.4
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 92.2
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 92.1
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 91.4
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 91.1
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 91.1
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 90.1
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 89.8
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 88.3
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 88.0
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 87.5
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 86.4
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 85.9
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 85.6
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 84.1
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 84.1
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 81.6
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 80.5
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 80.2
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 77.4
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 76.0
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 144.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 144.6
FF:10164-103B2 76 years, female 144.6

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 88.0
Pig sample Sample description nTPM
Caudate
nTPM: 88.1
Samples: 4

Max nTPM: 105.3
Min nTPM: 67.4
Sample A Female 67.4
Sample B Female 94.2
Sample C Male 105.3
Sample D Male 85.3

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