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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: High
Neuronal cells: High
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:120.5 nTPM
FANTOM5:176.8 Scaled Tags Per Million
Pig:51.9 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA045028
Glial cells High
Neuronal cells High



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 120.5
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 120.5
Samples: 246

Max nTPM: 184.6
Min nTPM: 79.1
Std nTPM: 17.4
Median nTPM: 118.2
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 184.6
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 173.9
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 171.2
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 169.0
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 167.4
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 162.8
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 160.4
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 160.3
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 158.0
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 157.5
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 156.1
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 155.9
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 155.8
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 155.4
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 153.3
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 152.5
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 151.5
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 149.9
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 148.1
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 147.7
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 146.9
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 146.1
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 145.8
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 145.7
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 145.0
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 144.9
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 144.3
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 143.8
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 143.8
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 142.5
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 141.9
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 141.7
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 140.0
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 139.9
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 139.1
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 138.3
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 138.0
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 137.7
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 137.3
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 137.1
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 135.4
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 134.8
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 134.8
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 134.5
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 133.6
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 133.3
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 132.9
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 132.9
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 132.7
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 132.3
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 132.2
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 131.8
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 131.2
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 130.9
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 130.8
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 130.5
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 130.4
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 130.3
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 129.5
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 129.4
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 129.2
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 129.1
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 128.7
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 128.6
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 128.2
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 128.2
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 128.1
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 127.5
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 127.3
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 127.3
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 127.2
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 127.1
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 126.9
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 126.8
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 126.6
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 126.5
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 126.5
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 126.4
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 126.2
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 126.2
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 126.1
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 126.1
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 125.9
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 125.9
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 125.8
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 125.4
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 125.0
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 125.0
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 124.9
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 124.4
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 124.1
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 124.1
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 124.0
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 123.4
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 122.7
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 122.5
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 122.2
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 122.1
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 122.1
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 121.9
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 121.7
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 121.4
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 121.3
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 121.3
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 121.0
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 121.0
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 121.0
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 120.7
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 120.4
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 120.1
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 120.1
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 120.0
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 119.9
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 119.9
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 119.8
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 119.6
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 119.5
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 119.2
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 119.0
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 118.9
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 118.9
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 118.9
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 118.3
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 118.2
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 118.0
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 118.0
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 118.0
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 117.8
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 117.2
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 117.1
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 117.0
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 116.9
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 116.4
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 116.3
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 116.2
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 115.8
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 115.7
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 115.6
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 114.9
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 114.9
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 114.9
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 114.5
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 114.3
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 114.3
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 114.1
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 114.0
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 114.0
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 113.9
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 113.7
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 113.6
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 113.6
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 113.6
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 113.5
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 113.5
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 113.5
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 113.1
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 112.8
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 112.7
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 112.7
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 112.7
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 112.7
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 112.2
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 111.9
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 111.8
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 111.8
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 111.1
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 111.0
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 111.0
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 110.6
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 110.4
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 110.3
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 110.2
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 109.9
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 109.9
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 109.9
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 109.6
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 109.6
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 109.6
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 109.4
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 109.3
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 109.1
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 109.0
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 109.0
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 108.8
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 108.3
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 108.2
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 107.9
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 107.9
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 107.9
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 107.8
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 107.7
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 107.6
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 107.6
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 107.6
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 106.9
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 106.8
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 106.5
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 106.5
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 106.4
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 106.2
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 106.0
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 105.8
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 105.8
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 105.0
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 104.9
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 104.8
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 104.8
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 104.6
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 104.4
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 104.3
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 103.8
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 103.7
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 103.4
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 103.1
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 102.4
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 102.4
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 102.1
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 102.0
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 101.6
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 101.4
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 100.6
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 100.5
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 100.5
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 100.3
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 100.2
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 99.2
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 99.0
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 98.5
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 98.4
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 98.0
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 97.0
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 96.9
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 96.8
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 96.4
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 95.9
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 95.9
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 95.2
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 94.8
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 94.7
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 94.3
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 93.7
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 92.4
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 89.2
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 88.8
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 83.1
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 79.1
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 176.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 176.8
FF:10164-103B2 76 years, female 176.8

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 51.9
Pig sample Sample description nTPM
Caudate
nTPM: 51.9
Samples: 4

Max nTPM: 60.7
Min nTPM: 45.4
Sample A Female 46.5
Sample B Female 54.9
Sample C Male 60.7
Sample D Male 45.4

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