AMYGDALA - Expression summary
Mouse brain, Intensity
Amygdalai 		127.237
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:1.8 nTPM
HPA:1.8 nTPM
GTEx:6.5 nTPM
FANTOM5:3.5 Scaled Tags Per Million
Pig:2.6 nTPM
Mouse:3.9 nTPM
Allen mouse:1.2 Expression energy

AMYGDALA - Mouse brain profilei , antibody HPA035982
Amygdala mean intensity 127.237
intensityi
FRONT BACK
Nucleus of the lateral olfactory tract 48.545
Basal medial amygdaloid nucleus 23.984
Basal lateral amygdala* -
Basal lateral amygdaloid nucleus 21.527
Cortical amygdala 72.336
Central amygdala 20.112
Medial amygdaloid nucleus 25.759

AMYGDALA - HPA Brain RNA-seq
Max nTPM 1.8
Sample id Sample description nTPM
Amygdala
nTPM: 1.8
2814 Male, age 76, right hemisphere 3.4
1987 Female, age 91, left hemisphere 3.2
2517 Female, age 94, left hemisphere 1.3
2695 Female, age 67, right hemisphere 0.5
2514 Male, age 75, right hemisphere 0.4
Basal amygdala
nTPM: 1.5
2243 Female, age 91, right hemisphere 2.2
1955 Male, age 76, both hemispheres 2.1
2609 Male, age 75, right hemisphere 1.7
2685 Female, age 94, left hemisphere 1.7
2110 Male, age 80, left hemisphere 0.7
2827 Female, age 67, right hemisphere 0.4
Central amygdala
nTPM: 1.4
1905 Male, age 76, both hemispheres 4.1
2239 Male, age 80, left hemisphere 1.6
2826 Female, age 94, left hemisphere 0.7
2515 Male, age 75, right hemisphere 0.3
2701 Female, age 91, right hemisphere 0.3
Corticomedial amygdala
nTPM: 1.8
2829 Male, age 80, left hemisphere 3.1
2240 Male, age 76, both hemispheres 2.4
2242 Female, age 91, right hemisphere 2.0
2535 Female, age 67, right hemisphere 1.6
2428 Male, age 75, right hemisphere 1.2
2429 Female, age 94, left hemisphere 0.8
Lateral amygdala
nTPM: 1.7
1883 Male, age 76, both hemispheres 6.8
2534 Female, age 94, left hemisphere 1.1
2255 Female, age 91, right hemisphere 0.8
2516 Male, age 75, right hemisphere 0.7
2830 Female, age 67, right hemisphere 0.6
2256 Male, age 80, left hemisphere 0.0
Stria terminalis, bed nucleus
nTPM: 1.2
2486 Female, age 94, both hemispheres 2.4
1974 Female, age 91, both hemispheres 1.0
2201 Male, age 74, unknown 0.1

AMYGDALA - GTEx RNA-seqi
Average nTPM 6.5
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 6.5
Samples: 152

Max nTPM: 25.8
Min nTPM: 0.3
Std nTPM: 4.7
Median nTPM: 5.6
GTEX-16YQH-0011-R4a-SM-7EPGI 30-39 years, male 25.8
GTEX-1B8L1-0011-R4a-SM-7EWFJ 60-69 years, male 25.1
GTEX-1313W-0011-R4b-SM-5KLZV 50-59 years, female 19.5
GTEX-11NUK-0011-R4a-SM-DO12B 50-59 years, male 18.5
GTEX-13VXU-0011-R4b-SM-5O9CI 50-59 years, male 17.5
GTEX-14JIY-0011-R4b-SM-5ZZV7 60-69 years, male 16.9
GTEX-17EVP-0011-R4a-SM-79OML 40-49 years, male 15.8
GTEX-1JMQJ-0011-R4b-SM-EXUT8 50-59 years, male 15.7
GTEX-P44G-0011-R4A-SM-2I3FB 30-39 years, male 15.5
GTEX-S7SE-0011-R4A-SM-2XCDB 50-59 years, male 15.3
GTEX-WZTO-0011-R4A-SM-3NMC7 40-49 years, male 14.6
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AMYGDALA - FANTOM5 CAGEi
Max Scaled Tags Per Million 3.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 3.5
FF:10151-102I7 76 years, female 3.5

AMYGDALA - Pig RNA-seqi
Average nTPM 2.6
Pig sample Sample description nTPM
Amygdala
nTPM: 2.6
Samples: 4

Max nTPM: 3.7
Min nTPM: 1.5
Sample A Female 3.6
Sample B Female 1.7
Sample C Male 3.7
Sample D Male 1.5

AMYGDALA - Mouse RNA-seqi
Average nTPM 3.9
Mouse sample Sample description nTPM
Amygdala
nTPM: 4.0
Samples: 4

Max nTPM: 4.9
Min nTPM: 3.0
Sample A Male 4.2
Sample B Male 3.7
Sample C Female 3.0
Sample D Female 4.9

AMYGDALA - Allen Mouse ISHi
Max Expression energy 1.2
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 1.2
69015326 Antisense, RP_050310_02_G02, Mouse strain C57BL/6J (56 days, male) 1.8
73592531 Antisense, RP_051017_01_E07, Mouse strain C57BL/6J (56 days, male) 0.6

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.