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TISSUE PRIMARY DATA VAGINA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Vagina
Tissue proteome
Vagina
VAGINA - Expression summary
Protein expression
Vaginai

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Squamous epithelial cells: High
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:80.1 nTPM
GTEx:80.1 nTPM
FANTOM5:9.2 Scaled Tags Per Million

VAGINA - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA044165Antibody HPA073122
Squamous epithelial cells MediumHigh




VAGINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 80.1
GTEx sample id Sample description nTPM
Vagina
Average nTPM: 80.1
Samples: 156

Max nTPM: 368.3
Min nTPM: 0.0
Std nTPM: 74.4
Median nTPM: 67.9
GTEX-1LNCM-1026-SM-E9U5D 50-59 years, female 368.3
GTEX-1AMFI-1526-SM-73KVY 50-59 years, female 315.8
GTEX-1LVAN-1626-SM-CNPQ7 50-59 years, female 237.0
GTEX-ZLWG-1126-SM-4WWFQ 50-59 years, female 232.7
GTEX-1JMQL-2326-SM-CNNPV 50-59 years, female 231.3
GTEX-S7SF-1426-SM-4AT5A 20-29 years, female 213.8
GTEX-14AS3-1726-SM-5RQJV 40-49 years, female 209.9
GTEX-11I78-2026-SM-5987C 50-59 years, female 207.1
GTEX-ZZPU-2226-SM-5EGIV 50-59 years, female 196.4
GTEX-16NGA-1626-SM-72D6M 40-49 years, female 196.2
GTEX-131XG-2126-SM-5DUXG 50-59 years, female 193.5
GTEX-17F9Y-2326-SM-7DUFP 70-79 years, female 192.1
GTEX-1F5PL-1826-SM-7P8PP 40-49 years, female 189.9
GTEX-14H4A-2426-SM-664OQ 40-49 years, female 183.1
GTEX-S341-1226-SM-4AD5S 40-49 years, female 180.7
GTEX-113JC-1926-SM-5N9GE 50-59 years, female 176.1
GTEX-T6MO-1226-SM-4DM5S 40-49 years, female 175.5
GTEX-14PJ6-1626-SM-6872D 60-69 years, female 174.9
GTEX-Y3IK-2226-SM-4YCD4 50-59 years, female 173.3
GTEX-14PN3-1626-SM-6AJAV 60-69 years, female 167.6
GTEX-14PKU-1326-SM-6871B 40-49 years, female 166.4
GTEX-11XUK-1326-SM-5EQM4 40-49 years, female 165.5
GTEX-13PL7-2726-SM-5L3GB 60-69 years, female 162.2
GTEX-YJ8O-1226-SM-5P9JE 40-49 years, female 162.1
GTEX-1MCYP-1326-SM-EV7AD 20-29 years, female 160.8
GTEX-14A5I-2726-SM-5SIB3 50-59 years, female 159.0
GTEX-U3ZN-0926-SM-4DXTU 30-39 years, female 155.1
GTEX-1CAMS-2326-SM-793CR 40-49 years, female 153.6
GTEX-SE5C-1126-SM-4BRWZ 40-49 years, female 152.8
GTEX-PWCY-1726-SM-48TD3 20-29 years, female 151.0
GTEX-15ER7-2526-SM-7KUFW 20-29 years, female 148.0
GTEX-OHPK-2526-SM-3MJH9 50-59 years, female 145.6
GTEX-14JG6-0726-SM-69LQH 30-39 years, female 145.5
GTEX-11EMC-1926-SM-5A5JU 60-69 years, female 144.0
GTEX-1HBPM-2726-SM-9WYUA 60-69 years, female 143.4
GTEX-QVJO-2526-SM-CYPRA 60-69 years, female 139.9
GTEX-N7MT-1926-SM-3LK5N 60-69 years, female 139.8
GTEX-14BMU-1926-SM-5S2QC 20-29 years, female 139.2
GTEX-13D11-1326-SM-5IJFY 50-59 years, female 138.2
GTEX-1HBPH-2926-SM-9WPNX 40-49 years, female 136.7
GTEX-11TTK-2726-SM-5GU58 60-69 years, female 134.3
GTEX-1J8EW-2526-SM-CKZO2 60-69 years, female 133.1
GTEX-15SDE-1726-SM-6LPJS 50-59 years, female 132.9
GTEX-PWN1-2526-SM-48TDS 40-49 years, female 127.8
GTEX-X8HC-2826-SM-46MWJ 50-59 years, female 126.3
GTEX-1LVAM-1926-SM-E6CIM 50-59 years, female 124.4
GTEX-1IDJU-1026-SM-AHZ2U 60-69 years, female 123.2
GTEX-1QP28-1426-SM-EVR4E 50-59 years, female 123.2
GTEX-1C475-0526-SM-793AC 40-49 years, female 122.0
GTEX-Q734-1426-SM-DTXFX 40-49 years, female 121.1
GTEX-1A8FM-2426-SM-7IGPE 50-59 years, female 120.1
GTEX-1JN76-1526-SM-CNPPF 20-29 years, female 117.2
GTEX-18A7A-2826-SM-7LT8J 50-59 years, female 110.1
GTEX-TML8-1126-SM-4DXSS 40-49 years, female 109.6
GTEX-ZC5H-2226-SM-4WAWS 40-49 years, female 107.5
GTEX-145ME-1426-SM-5RQJS 40-49 years, female 106.2
GTEX-1J1OQ-1826-SM-CL53R 40-49 years, female 105.9
GTEX-ZXES-0626-SM-5E45P 30-39 years, female 105.3
GTEX-1399S-2326-SM-5K7YV 30-39 years, female 104.4
GTEX-1LGOU-1126-SM-D3LAI 20-29 years, female 102.1
GTEX-1HCU6-2326-SM-ACKXP 60-69 years, female 100.6
GTEX-11VI4-0726-SM-5GU5B 40-49 years, female 99.9
GTEX-ZVT2-0626-SM-5GICR 50-59 years, female 99.3
GTEX-Y8LW-1426-SM-5RQJJ 50-59 years, female 97.9
GTEX-13QBU-1726-SM-5IJFQ 40-49 years, female 95.7
GTEX-S4P3-1126-SM-4AD52 50-59 years, female 91.8
GTEX-16NPV-2526-SM-6M483 50-59 years, female 90.4
GTEX-18D9A-1026-SM-7KFRU 30-39 years, female 90.4
GTEX-1NUQO-1826-SM-E6CQU 20-29 years, female 89.5
GTEX-1HCUA-1026-SM-A9SMI 50-59 years, female 88.2
GTEX-1GN1W-1526-SM-7P8TG 50-59 years, female 85.7
GTEX-11P81-2126-SM-5HL6N 30-39 years, female 84.6
GTEX-1117F-2526-SM-5GZY6 60-69 years, female 80.6
GTEX-P78B-2226-SM-3P5ZZ 40-49 years, female 80.1
GTEX-1399U-1526-SM-5J2N7 50-59 years, female 74.0
GTEX-15SHU-2926-SM-7KUKT 40-49 years, female 72.7
GTEX-SN8G-2626-SM-EXUQT 50-59 years, female 70.7
GTEX-PX3G-2526-SM-48TZV 20-29 years, female 69.5
GTEX-ZP4G-0826-SM-4WWF3 20-29 years, female 66.3
GTEX-ZYY3-2626-SM-5N9DH 60-69 years, female 66.1
GTEX-11DXX-1726-SM-5H11T 60-69 years, female 63.5
GTEX-1GF9U-1926-SM-7P8TZ 40-49 years, female 63.0
GTEX-QCQG-1226-SM-48U23 50-59 years, female 60.8
GTEX-ZTPG-2226-SM-57WF9 20-29 years, female 60.2
GTEX-15SB6-1426-SM-7KUEM 50-59 years, female 57.0
GTEX-146FH-2626-SM-5Q5E1 50-59 years, female 55.1
GTEX-XUW1-0326-SM-4BOOR 50-59 years, female 51.6
GTEX-1GN1U-2426-SM-9KNTU 50-59 years, female 51.3
GTEX-1S5ZU-2626-SM-E9TII 20-29 years, female 50.9
GTEX-13U4I-2026-SM-5LU3L 40-49 years, female 48.9
GTEX-T2IS-1926-SM-4DM74 20-29 years, female 47.2
GTEX-X15G-1926-SM-4PQZQ 50-59 years, female 40.2
GTEX-13PVR-1426-SM-5S2PW 60-69 years, female 38.4
GTEX-1R9JW-1426-SM-DTX9K 30-39 years, female 38.3
GTEX-1ICG6-1626-SM-ARL81 70-79 years, female 37.7
GTEX-ZGAY-2226-SM-4YCCX 40-49 years, female 35.9
GTEX-TMMY-1926-SM-4DXUU 40-49 years, female 33.6
GTEX-WYVS-1426-SM-4ONCV 40-49 years, female 33.1
GTEX-1LH75-1726-SM-DHXKZ 50-59 years, female 28.4
GTEX-QDT8-2526-SM-48TYX 30-39 years, female 26.0
GTEX-PLZ4-2726-SM-3P61A 50-59 years, female 25.3
GTEX-ZE7O-2426-SM-57WD7 50-59 years, female 23.9
GTEX-P4PP-2526-SM-3P61P 30-39 years, female 22.4
GTEX-TSE9-2526-SM-4DXUS 60-69 years, female 21.6
GTEX-13QIC-1826-SM-5J1MY 60-69 years, female 19.1
GTEX-146FR-2426-SM-5NQAU 60-69 years, female 15.6
GTEX-17JCI-2526-SM-7DHLB 60-69 years, female 15.3
GTEX-NPJ7-2526-SM-EV79A 60-69 years, female 15.2
GTEX-ZYVF-0326-SM-5GIES 50-59 years, female 13.8
GTEX-XUZC-1226-SM-4BRVJ 30-39 years, female 11.9
GTEX-1GMR8-2526-SM-7RHI9 50-59 years, female 10.3
GTEX-1PIEJ-1926-SM-EVYB7 20-29 years, female 10.1
GTEX-14PJM-2926-SM-69LOE 50-59 years, female 10.0
GTEX-RWS6-1726-SM-47JXP 60-69 years, female 9.6
GTEX-1QCLZ-2226-SM-DTX7R 60-69 years, female 9.3
GTEX-XV7Q-1626-SM-4BRWC 40-49 years, female 8.7
GTEX-OHPL-2526-SM-3MJGT 60-69 years, female 7.8
GTEX-1I1GT-1226-SM-B2LVK 60-69 years, female 7.0
GTEX-131YS-2426-SM-5J2OD 60-69 years, female 6.6
GTEX-14DAQ-2326-SM-5S2QX 60-69 years, female 6.6
GTEX-OHPN-2426-SM-E9TI5 60-69 years, female 6.1
GTEX-1F48J-2526-SM-7P8TU 50-59 years, female 4.3
GTEX-15DYW-2926-SM-6PANA 60-69 years, female 3.5
GTEX-ZVT3-2726-SM-5GU5X 60-69 years, female 3.5
GTEX-1QPFJ-1626-SM-DTX7X 30-39 years, female 2.6
GTEX-WRHU-2926-SM-4MVNQ 50-59 years, female 1.6
GTEX-UJHI-1326-SM-4IHJO 50-59 years, female 1.4
GTEX-183WM-2126-SM-7LG4I 70-79 years, female 1.3
GTEX-ZQG8-1126-SM-51MRL 60-69 years, female 1.1
GTEX-12ZZX-1926-SM-5EGKC 40-49 years, female 1.0
GTEX-1HFI7-1126-SM-A96S5 50-59 years, female 0.8
GTEX-S4UY-1326-SM-4AD4X 40-49 years, female 0.7
GTEX-1MCC2-1126-SM-EVYD6 30-39 years, female 0.7
GTEX-1LGRB-2126-SM-COH48 50-59 years, female 0.5
GTEX-YFC4-2926-SM-5IFJ8 40-49 years, female 0.4
GTEX-145LS-2526-SM-5TDC9 60-69 years, female 0.3
GTEX-147F3-1526-SM-5SIAK 50-59 years, female 0.3
GTEX-15UF6-2126-SM-6M46Z 70-79 years, female 0.3
GTEX-1EWIQ-2326-SM-7IGNF 70-79 years, female 0.3
GTEX-12WSJ-1326-SM-5GCOB 40-49 years, female 0.2
GTEX-13W3W-2326-SM-5LU4Y 60-69 years, female 0.2
GTEX-11GSP-2226-SM-5HL5Q 60-69 years, female 0.1
GTEX-Y114-1926-SM-4TT8J 50-59 years, female 0.1
GTEX-ZV6S-1326-SM-59HJA 40-49 years, female 0.1
GTEX-11EM3-1826-SM-5A5KO 20-29 years, female 0.0
GTEX-12WSD-2926-SM-5LZUH 60-69 years, female 0.0
GTEX-13N11-1526-SM-5L3FL 50-59 years, female 0.0
GTEX-13OVI-0926-SM-5J1MI 60-69 years, female 0.0
GTEX-RU1J-1426-SM-46MUV 20-29 years, female 0.0
GTEX-W5WG-1026-SM-4LMIF 50-59 years, female 0.0
GTEX-WEY5-0826-SM-4LMIH 40-49 years, female 0.0
GTEX-1HCU8-2026-SM-9YFLE 60-69 years, female 0.0
GTEX-1I4MK-1726-SM-ARL7O 50-59 years, female 0.0
GTEX-1IE54-2626-SM-CMKFY 40-49 years, female 0.0
GTEX-1JN1M-2326-SM-ARZNG 60-69 years, female 0.0
GTEX-ZAK1-2426-SM-EXOHM 50-59 years, female 0.0
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VAGINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 9.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Vagina
Scaled Tags Per Million: 9.2
FF:10204-103F6 68 years, female 9.2

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