HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:13.6 nTPM
HPA:13.6 nTPM
GTEx:11.3 nTPM
FANTOM5:63.7 Scaled Tags Per Million
Pig:15.9 nTPM
Mouse:31.0 nTPM
Allen mouse:7.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA047118
Glial cells High
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 13.6
Sample id Sample description nTPM
Hippocampus
nTPM: 13.5
1911 Female, age 85, right hemisphere 14.3
1855 Male, age 76, left hemisphere 13.6
2529 Female, age 94, left hemisphere 13.5
2148 Female, age 91, left hemisphere 13.4
1898 Male, age 80, left hemisphere 13.3
2621 Female, age 67, right hemisphere 13.0
Dentate gyrus
nTPM: 13.1
2010 Male, age 76, both hemispheres 13.4
1927 Female, age 91, both hemispheres 13.3
2246 Female, age 85, both hemispheres 13.3
2530 Female, age 94, left hemisphere 13.3
2531 Female, age 67, both hemispheres 13.2
2528 Male, age 74, both hemispheres 12.2
Entorhinal gyrus
nTPM: 13.2
2117 Female, age 91, right hemisphere 14.4
1938 Female, age 85, left hemisphere 13.5
2686 Male, age 75, right hemisphere 13.5
1787 Male, age 76, left hemisphere 12.7
2613 Female, age 94, left hemisphere 12.4
2764 Male, age 80, right hemisphere 12.4
Hippocampus, CA1
nTPM: 13.5
2045 Male, age 76, both hemispheres 14.4
1873 Female, age 85, both hemispheres 14.2
2527 Male, age 74, both hemispheres 13.1
2749 Male, age 80, left hemisphere 13.0
2082 Female, age 91, right hemisphere 12.7
Hippocampus, CA2
nTPM: 13.1
2113 Female, age 91, right hemisphere 13.4
1940 Female, age 85, left hemisphere 13.3
1892 Male, age 76, both hemispheres 13.2
2249 Male, age 74, both hemispheres 13.0
2437 Female, age 94, left hemisphere 12.9
1963 Male, age 80, left hemisphere 12.5
Hippocampus, CA3
nTPM: 13.3
1891 Female, age 85, both hemispheres 15.0
1867 Male, age 76, both hemispheres 14.1
2436 Male, age 74, both hemispheres 13.4
2137 Male, age 80, left hemisphere 13.1
2620 Female, age 94, left hemisphere 12.3
2861 Female, age 67, both hemispheres 12.2
Parahippocampal cortex
nTPM: 13.2
1850 Male, age 80, both hemispheres 14.1
2018 Male, age 76, both hemispheres 13.9
2532 Female, age 72, left hemisphere 13.6
1990 Female, age 91, right hemisphere 13.4
2250 Female, age 67, right hemisphere 13.3
1933 Female, age 85, both hemispheres 13.2
2245 Female, age 91, both hemispheres 13.1
2693 Female, age 94, both hemispheres 12.8
2692 Male, age 74, both hemispheres 12.6
2622 Female, age 67, right hemisphere 11.9
Perirhinal gyrus
nTPM: 13.2
1841 Female, age 85, right hemisphere 14.1
1794 Male, age 80, right hemisphere 13.4
2848 Male, age 76, right hemisphere 13.3
1847 Female, age 91, left hemisphere 13.0
2521 Female, age 94, right hemisphere 12.4
Subiculum
nTPM: 13.6
2042 Male, age 76, both hemispheres 14.4
1901 Male, age 80, both hemispheres 14.1
1977 Female, age 85, both hemispheres 14.0
2729 Female, age 91, right hemisphere 13.2
2438 Female, age 94, left hemisphere 13.1
2619 Male, age 74, both hemispheres 12.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 11.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 11.3
Samples: 197

Max nTPM: 20.7
Min nTPM: 7.2
Std nTPM: 2.2
Median nTPM: 10.9
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 20.7
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 18.8
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 17.9
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 17.5
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 17.4
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 16.9
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 16.1
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 16.0
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 15.9
GTEX-17EVQ-0011-R1a-SM-7189S 70-79 years, male 15.4
GTEX-16XZZ-0011-R1a-SM-7LTAH 60-69 years, male 15.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 63.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 63.7
FF:10169-103B7 60 years, female 64.8
FF:10153-102I9 76 years, female 62.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 15.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 15.9
Samples: 4

Max nTPM: 18.2
Min nTPM: 14.7
Sample A Female 15.5
Sample B Female 14.7
Sample C Male 18.2
Sample D Male 15.3
Entorhinal cortex
nTPM: 14.8
Samples: 4

Max nTPM: 16.0
Min nTPM: 13.6
Sample A Female 15.3
Sample B Female 16.0
Sample C Male 14.1
Sample D Male 13.6
Subiculum
nTPM: 15.0
Samples: 4

Max nTPM: 15.3
Min nTPM: 14.8
Sample A Female 15.3
Sample B Female 15.0
Sample C Male 14.8
Sample D Male 15.0
Ventral hippocampus
nTPM: 14.9
Samples: 4

Max nTPM: 16.4
Min nTPM: 13.8
Sample A Female 13.8
Sample B Female 14.3
Sample C Male 16.4
Sample D Male 15.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 31.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 27.3
Samples: 4

Max nTPM: 29.7
Min nTPM: 24.6
Sample A Male 27.2
Sample B Male 27.7
Sample C Female 29.7
Sample D Female 24.6
Hippocampal formation
nTPM: 31.1
Samples: 4

Max nTPM: 34.6
Min nTPM: 27.9
Sample A Male 34.6
Sample B Male 32.0
Sample C Female 27.9
Sample D Female 29.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 7.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 7.9
69080039 Antisense, RP_050324_01_F02, Mouse strain C57BL/6J (56 days, male) 7.9

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The Human Protein Atlas

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