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TMEM230
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TISSUE PRIMARY DATA SMALL INTESTINE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Small intestine
Tissue proteome
Intestine
SMALL INTESTINE - Expression summary
Protein expression
Small intestinei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glandular cells: High
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:70.2 nTPM
HPA:70.2 nTPM
GTEx:61.3 nTPM
FANTOM5:53.7 Scaled Tags Per Million

SMALL INTESTINE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA009078
Glandular cells High



SMALL INTESTINE - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Read more
Average nTPM 70.2
overview
Male, age 65
Small intestine sample 232
nTPM: 57
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40

overview
Male, age 39
Small intestine sample 233
nTPM: 74.5
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55

overview
Male, age 68
Small intestine sample 234
nTPM: 68.4
Cell types%
Glandular cells:
30

Smooth muscle cells:
15

Other cell types:
55

N/A
Male, age 85
Small intestine sample 235
nTPM: 80.9

SMALL INTESTINE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 61.3
GTEx sample id Sample description nTPM
Small Intestine - Terminal Ileum
Average nTPM: 61.3
Samples: 187

Max nTPM: 141.2
Min nTPM: 36.0
Std nTPM: 14.8
Median nTPM: 58.1
GTEX-13W3W-2026-SM-5K7UL 60-69 years, female 141.2
GTEX-Y111-2226-SM-4SOJB 50-59 years, male 102.1
GTEX-1NSGN-2126-SM-DPRYN 50-59 years, male 101.1
GTEX-1BAJH-2526-SM-7IGOT 70-79 years, male 96.8
GTEX-1S82Z-1826-SM-E9TIK 30-39 years, female 95.8
GTEX-1R9K5-2026-SM-E6CPS 50-59 years, male 93.1
GTEX-117YX-0326-SM-5GICL 50-59 years, male 91.1
GTEX-1192X-2526-SM-59868 50-59 years, male 90.5
GTEX-ZF2S-1726-SM-57WFT 50-59 years, female 89.5
GTEX-XPVG-1726-SM-4B65W 50-59 years, male 88.9
GTEX-13NYB-1826-SM-5J1N3 40-49 years, male 88.4
GTEX-1MUQO-2426-SM-EAZ5A 60-69 years, male 87.1
GTEX-139YR-2226-SM-5IFFW 50-59 years, male 84.8
GTEX-15EU6-1826-SM-7PC1W 50-59 years, male 84.0
GTEX-1QCLZ-2126-SM-EWRNC 60-69 years, female 83.6
GTEX-1EMGI-2826-SM-7IGMR 60-69 years, male 82.9
GTEX-1I1GT-1826-SM-ARZLW 60-69 years, female 82.4
GTEX-1JMQK-2426-SM-CXZJU 60-69 years, male 82.1
GTEX-1PIEJ-1526-SM-E6CP8 20-29 years, female 80.9
GTEX-17KNJ-1626-SM-718AL 50-59 years, male 80.6
GTEX-1JJE9-2226-SM-CXZJM 70-79 years, male 80.5
GTEX-1R7EV-1226-SM-DTX82 40-49 years, male 80.0
GTEX-1OKEX-1126-SM-DTXEB 60-69 years, male 79.2
GTEX-1R9K4-2326-SM-E6CRB 60-69 years, male 78.0
GTEX-1QW4Y-1226-SM-EWRMY 30-39 years, male 77.6
GTEX-WFON-1526-SM-4LVMP 40-49 years, male 76.5
GTEX-1RAZR-1826-SM-E6CRE 40-49 years, male 76.0
GTEX-ZAB5-1526-SM-5HL9P 50-59 years, male 75.8
GTEX-WYJK-1526-SM-4ONCW 50-59 years, male 75.1
GTEX-Y5V5-1826-SM-4VDS5 60-69 years, female 75.1
GTEX-XMK1-1826-SM-4B66F 40-49 years, male 75.0
GTEX-1QP28-1726-SM-E6CRK 50-59 years, female 74.5
GTEX-Y3IK-1726-SM-4YCCR 50-59 years, female 74.0
GTEX-13O21-1026-SM-5IJDU 50-59 years, male 73.6
GTEX-1RAZA-1826-SM-DTXA2 20-29 years, male 73.6
GTEX-1MGNQ-2326-SM-EV7BG 40-49 years, male 73.3
GTEX-1R9PM-1626-SM-DPRY9 20-29 years, male 73.2
GTEX-111CU-1326-SM-5NQ8L 50-59 years, male 72.9
GTEX-Y5LM-1626-SM-4VDTB 40-49 years, female 72.7
GTEX-13RTK-0826-SM-5Q5C6 20-29 years, male 71.7
GTEX-16NGA-1126-SM-7KFSY 40-49 years, female 71.4
GTEX-Y3I4-1326-SM-4TT8Z 50-59 years, male 71.4
GTEX-14C39-1826-SM-5ZZW4 40-49 years, male 71.1
GTEX-WHSB-1026-SM-4M1XN 50-59 years, male 71.0
GTEX-1C64O-2526-SM-79ONO 60-69 years, male 70.1
GTEX-WFG8-1626-SM-4LVMB 20-29 years, male 70.1
GTEX-1B8KZ-1126-SM-7IGLX 50-59 years, male 69.8
GTEX-17MFQ-1026-SM-7KFSZ 20-29 years, male 69.7
GTEX-X5EB-1626-SM-4E3IV 40-49 years, male 69.6
GTEX-ZQUD-0926-SM-57WE3 30-39 years, male 69.6
GTEX-14PJ3-1326-SM-664O7 50-59 years, male 69.4
GTEX-UPK5-2026-SM-4JBIM 40-49 years, male 69.3
GTEX-YEC4-1726-SM-4W21E 40-49 years, male 68.9
GTEX-WEY5-1526-SM-4LMJF 40-49 years, female 68.7
GTEX-ZPIC-2326-SM-57WDW 40-49 years, female 68.7
GTEX-ZQG8-2526-SM-57WEQ 60-69 years, female 68.2
GTEX-1K9T9-2726-SM-D4P3E 50-59 years, female 67.9
GTEX-1AMFI-1926-SM-731F2 50-59 years, female 67.7
GTEX-1R9JW-1926-SM-EVR4J 30-39 years, female 67.3
GTEX-12WSK-1526-SM-5CVNO 40-49 years, female 67.1
GTEX-131XE-0926-SM-5HL7J 50-59 years, male 66.2
GTEX-1R7EU-1326-SM-E6CQ6 60-69 years, male 64.9
GTEX-WFG7-1726-SM-4LVME 20-29 years, male 64.6
GTEX-ZA64-1226-SM-5HL7B 20-29 years, male 64.2
GTEX-WY7C-1826-SM-4ONCE 50-59 years, male 63.5
GTEX-1L5NE-1826-SM-EV79T 50-59 years, male 63.4
GTEX-VJYA-0926-SM-4KL1N 60-69 years, male 63.3
GTEX-17HHE-1726-SM-79OKT 50-59 years, male 63.1
GTEX-1LH75-1926-SM-DIPGD 50-59 years, female 63.0
GTEX-14PK6-1626-SM-6871I 70-79 years, female 62.6
GTEX-1399R-2026-SM-5K7WN 30-39 years, male 62.4
GTEX-ZP4G-1626-SM-57WGD 20-29 years, female 62.4
GTEX-1H11D-2526-SM-9JGGU 40-49 years, male 62.4
GTEX-14XAO-1926-SM-6ETZO 60-69 years, female 62.1
GTEX-ZG7Y-1926-SM-DNZZ5 50-59 years, male 62.1
GTEX-1497J-1926-SM-5TDCC 60-69 years, male 62.0
GTEX-X15G-1426-SM-4PQZK 50-59 years, female 61.8
GTEX-139T6-1026-SM-5IJGC 50-59 years, male 61.6
GTEX-11VI4-1626-SM-5EQKO 40-49 years, female 61.4
GTEX-1PDJ9-1826-SM-E9U66 20-29 years, male 61.2
GTEX-WRHK-1026-SM-4MVOD 20-29 years, female 60.7
GTEX-131XF-1326-SM-5GCMQ 60-69 years, male 60.6
GTEX-1LBAC-1526-SM-CXZKU 20-29 years, male 60.5
GTEX-13111-1426-SM-5DUW3 50-59 years, male 60.2
GTEX-14PJN-0826-SM-686ZL 30-39 years, male 60.2
GTEX-145LT-1026-SM-5LU9O 40-49 years, male 59.9
GTEX-13D11-0726-SM-5LZZB 50-59 years, female 59.8
GTEX-1H1DE-1426-SM-9JGHV 20-29 years, male 59.8
GTEX-14PJ6-1726-SM-6AJBN 60-69 years, female 59.6
GTEX-ZYFG-2026-SM-5E43Y 60-69 years, female 59.1
GTEX-14BMU-1426-SM-5TDE5 20-29 years, female 59.0
GTEX-11LCK-1926-SM-5A5KE 30-39 years, male 58.3
GTEX-ZLV1-1126-SM-4WWBW 60-69 years, female 58.3
GTEX-ZTPG-2626-SM-57WFX 20-29 years, female 58.1
GTEX-16AAH-1426-SM-7KFTR 50-59 years, male 58.0
GTEX-1QP2A-2426-SM-EXOJA 50-59 years, male 58.0
GTEX-11NSD-1726-SM-5N9C3 20-29 years, male 57.9
GTEX-ZPCL-1726-SM-57WEO 60-69 years, female 57.9
GTEX-14DAR-1426-SM-5RQIR 50-59 years, male 57.8
GTEX-1HSMQ-2226-SM-C1YRD 50-59 years, male 57.7
GTEX-13113-1226-SM-5EGHT 60-69 years, female 57.6
GTEX-1GL5R-2026-SM-7MKHP 50-59 years, male 57.3
GTEX-1LGOU-1426-SM-D3L8N 20-29 years, female 57.1
GTEX-1CAMS-2426-SM-7DHMV 40-49 years, female 56.7
GTEX-1QPFJ-2626-SM-DPRZU 30-39 years, female 56.2
GTEX-XUZC-1426-SM-4BRV3 30-39 years, female 55.9
GTEX-YFCO-1326-SM-664NV 40-49 years, male 55.8
GTEX-1122O-1326-SM-5H11F 60-69 years, female 55.0
GTEX-11P82-0826-SM-5P9GU 20-29 years, male 55.0
GTEX-1OJC3-1626-SM-E9U65 20-29 years, male 54.8
GTEX-13PL7-2626-SM-5IFH4 60-69 years, female 54.7
GTEX-145ME-0926-SM-5O9AR 40-49 years, female 54.6
GTEX-14PN3-2026-SM-68729 60-69 years, female 54.5
GTEX-1AX8Z-2526-SM-731E3 60-69 years, male 54.4
GTEX-XXEK-1026-SM-4BRUW 50-59 years, male 54.3
GTEX-18A66-2526-SM-7KFTZ 60-69 years, male 54.2
GTEX-XGQ4-1326-SM-4GIDU 50-59 years, male 54.1
GTEX-144GM-1026-SM-79OKU 20-29 years, male 54.0
GTEX-183FY-1626-SM-793D8 20-29 years, male 53.4
GTEX-15DZA-0826-SM-6AJBF 30-39 years, female 53.2
GTEX-16A39-1426-SM-6LLI6 30-39 years, female 53.2
GTEX-1C475-1426-SM-793CH 40-49 years, female 53.2
GTEX-YB5E-1526-SM-5IFIE 40-49 years, male 53.1
GTEX-ZC5H-2326-SM-4WAYT 40-49 years, female 52.9
GTEX-14PKU-1626-SM-6871C 40-49 years, female 52.5
GTEX-Y9LG-1626-SM-5IFHM 30-39 years, male 52.2
GTEX-ZTX8-0526-SM-59HLD 20-29 years, male 52.0
GTEX-ZXES-1526-SM-5NQ95 30-39 years, female 52.0
GTEX-ZLWG-1626-SM-DNZZ1 50-59 years, female 52.0
GTEX-1399U-2126-SM-5IFEZ 50-59 years, female 51.8
GTEX-ZEX8-1826-SM-57WBH 50-59 years, male 51.8
GTEX-1IKOE-1926-SM-ARU7V 30-39 years, female 51.8
GTEX-1J8QM-1026-SM-C1YQA 60-69 years, female 51.8
GTEX-ZDTT-1726-SM-5HL69 60-69 years, male 51.8
GTEX-1KXAM-2026-SM-DHXKI 60-69 years, male 51.6
GTEX-1CB4F-1826-SM-7MGXI 60-69 years, male 51.5
GTEX-1CAMR-0826-SM-7MKFK 20-29 years, male 51.3
GTEX-1GMR2-1026-SM-7MKHJ 50-59 years, male 51.2
GTEX-VUSG-1726-SM-4KKZL 50-59 years, male 51.1
GTEX-1RAZQ-2226-SM-DPRZR 30-39 years, male 51.1
GTEX-WH7G-1626-SM-4LVMY 40-49 years, male 51.0
GTEX-ZVZP-1826-SM-5GZXB 50-59 years, male 51.0
GTEX-18QFQ-1626-SM-72D7H 30-39 years, male 50.8
GTEX-1JK1U-1226-SM-CNNPN 60-69 years, male 50.5
GTEX-WFJO-0926-SM-4LVM2 30-39 years, male 50.1
GTEX-13X6H-1826-SM-7EWCZ 50-59 years, female 49.9
GTEX-148VJ-2226-SM-5NQ9M 70-79 years, male 49.9
GTEX-16MTA-1526-SM-6LPJB 50-59 years, male 49.8
GTEX-1B8KE-1726-SM-7IGMN 50-59 years, male 49.7
GTEX-11XUK-1426-SM-5EQMG 40-49 years, female 49.6
GTEX-XBED-1426-SM-4AT4G 60-69 years, male 49.6
GTEX-12BJ1-1926-SM-5HL9Z 60-69 years, male 48.5
GTEX-13FH7-1226-SM-5IJFK 50-59 years, female 48.4
GTEX-14E6E-1626-SM-5RQI7 30-39 years, male 48.3
GTEX-13QBU-1926-SM-5IJEW 40-49 years, female 48.2
GTEX-13O61-1326-SM-5KM31 60-69 years, male 48.0
GTEX-14PKV-2026-SM-6AJ9A 20-29 years, female 47.7
GTEX-11EQ9-1326-SM-5985X 30-39 years, male 47.3
GTEX-13FTW-2026-SM-5IJE2 40-49 years, male 47.3
GTEX-15G1A-1726-SM-6LPI4 30-39 years, male 47.3
GTEX-WQUQ-2426-SM-4MVNW 60-69 years, male 47.3
GTEX-XAJ8-0526-SM-47JYK 40-49 years, male 47.2
GTEX-ZVT2-2126-SM-5NQ93 50-59 years, female 47.2
GTEX-ZVP2-1726-SM-5GU5P 50-59 years, male 46.6
GTEX-ZF29-1626-SM-4WKFJ 60-69 years, female 46.3
GTEX-1JN76-1126-SM-C1YRL 20-29 years, female 46.3
GTEX-Y114-1426-SM-4TT6W 50-59 years, female 46.1
GTEX-11I78-1126-SM-5A5K5 50-59 years, female 45.4
GTEX-11P7K-1626-SM-5GU63 30-39 years, male 45.2
GTEX-ZTSS-0926-SM-59865 40-49 years, male 45.2
GTEX-131XG-1726-SM-5LZUR 50-59 years, female 44.9
GTEX-1GMR3-2726-SM-7MKFB 40-49 years, male 44.8
GTEX-11DXZ-1326-SM-5H11X 50-59 years, male 44.6
GTEX-13OVI-1926-SM-5IJCG 60-69 years, female 44.6
GTEX-1J8Q3-2526-SM-CNNQ4 60-69 years, male 43.6
GTEX-11TUW-1926-SM-5BC58 60-69 years, male 43.3
GTEX-11DXX-1626-SM-5H11H 60-69 years, female 43.0
GTEX-133LE-1426-SM-5IFH1 20-29 years, female 43.0
GTEX-ZLFU-1526-SM-4WWBT 40-49 years, male 42.9
GTEX-1F75I-2526-SM-9WPOZ 40-49 years, male 42.7
GTEX-Z9EW-0926-SM-5CVMM 40-49 years, male 42.5
GTEX-YF7O-1826-SM-5IFIU 50-59 years, male 42.3
GTEX-111YS-1426-SM-5GID8 60-69 years, male 41.9
GTEX-1S5ZA-1326-SM-EV7BB 20-29 years, male 40.8
GTEX-ZZ64-0526-SM-5GZXM 20-29 years, male 39.6
GTEX-1399S-2026-SM-5KM4B 30-39 years, female 36.3
GTEX-13CF3-1226-SM-5LZXN 60-69 years, female 36.0
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SMALL INTESTINE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 53.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Small intestine
Scaled Tags Per Million: 53.7
FF:10024-101D6 15,40,85 years, mixed 53.7

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