HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:1.2 nTPM
HPA:1.2 nTPM
GTEx:3.0 nTPM
FANTOM5:9.3 Scaled Tags Per Million
Pig:50.3 nTPM
Mouse:17.4 nTPM
Allen mouse:0.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA030824Antibody HPA030825
Glial cells Not detectedMedium
Neuronal cells Not detectedLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 1.2
Sample id Sample description nTPM
Hippocampus
nTPM: 0.9
2529 Female, age 94, left hemisphere 2.3
2621 Female, age 67, right hemisphere 1.4
1911 Female, age 85, right hemisphere 1.2
1898 Male, age 80, left hemisphere 0.3
2148 Female, age 91, left hemisphere 0.2
1855 Male, age 76, left hemisphere 0.1
Dentate gyrus
nTPM: 0.6
1927 Female, age 91, both hemispheres 1.3
2531 Female, age 67, both hemispheres 1.0
2530 Female, age 94, left hemisphere 0.7
2246 Female, age 85, both hemispheres 0.4
2010 Male, age 76, both hemispheres 0.0
2528 Male, age 74, both hemispheres 0.0
Entorhinal gyrus
nTPM: 0.4
2686 Male, age 75, right hemisphere 1.3
1938 Female, age 85, left hemisphere 1.1
2764 Male, age 80, right hemisphere 0.2
2613 Female, age 94, left hemisphere 0.1
1787 Male, age 76, left hemisphere 0.0
2117 Female, age 91, right hemisphere 0.0
Hippocampus, CA1
nTPM: 0.5
1873 Female, age 85, both hemispheres 1.3
2045 Male, age 76, both hemispheres 0.9
2749 Male, age 80, left hemisphere 0.5
2082 Female, age 91, right hemisphere 0.0
2527 Male, age 74, both hemispheres 0.0
Hippocampus, CA2
nTPM: 0.8
1892 Male, age 76, both hemispheres 2.5
2437 Female, age 94, left hemisphere 2.1
1963 Male, age 80, left hemisphere 0.4
1940 Female, age 85, left hemisphere 0.0
2113 Female, age 91, right hemisphere 0.0
2249 Male, age 74, both hemispheres 0.0
Hippocampus, CA3
nTPM: 1.0
2861 Female, age 67, both hemispheres 2.0
1867 Male, age 76, both hemispheres 1.4
2137 Male, age 80, left hemisphere 1.3
2436 Male, age 74, both hemispheres 0.9
2620 Female, age 94, left hemisphere 0.2
1891 Female, age 85, both hemispheres 0.1
Parahippocampal cortex
nTPM: 1.2
2245 Female, age 91, both hemispheres 2.3
1850 Male, age 80, both hemispheres 2.0
2532 Female, age 72, left hemisphere 1.9
2622 Female, age 67, right hemisphere 1.5
2693 Female, age 94, both hemispheres 1.4
2018 Male, age 76, both hemispheres 1.2
1933 Female, age 85, both hemispheres 1.0
2250 Female, age 67, right hemisphere 0.6
1990 Female, age 91, right hemisphere 0.0
2692 Male, age 74, both hemispheres 0.0
Perirhinal gyrus
nTPM: 1.1
1841 Female, age 85, right hemisphere 1.8
2848 Male, age 76, right hemisphere 1.8
1847 Female, age 91, left hemisphere 1.3
1794 Male, age 80, right hemisphere 0.8
2521 Female, age 94, right hemisphere 0.0
Subiculum
nTPM: 0.5
1901 Male, age 80, both hemispheres 1.4
2438 Female, age 94, left hemisphere 1.3
2619 Male, age 74, both hemispheres 0.2
1977 Female, age 85, both hemispheres 0.1
2042 Male, age 76, both hemispheres 0.0
2729 Female, age 91, right hemisphere 0.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 3.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 3.0
Samples: 197

Max nTPM: 8.4
Min nTPM: 0.0
Std nTPM: 1.4
Median nTPM: 2.8
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 8.4
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 6.5
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 6.3
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 5.7
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 5.6
GTEX-P44H-0011-R1A-SM-3NM8J 40-49 years, male 5.6
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 5.6
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 5.5
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 5.5
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 5.3
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 5.2
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 9.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 9.3
FF:10169-103B7 60 years, female 12.5
FF:10153-102I9 76 years, female 6.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 50.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 32.2
Samples: 4

Max nTPM: 39.3
Min nTPM: 25.3
Sample A Female 39.3
Sample B Female 26.7
Sample C Male 37.4
Sample D Male 25.3
Entorhinal cortex
nTPM: 50.3
Samples: 4

Max nTPM: 60.9
Min nTPM: 39.9
Sample A Female 49.3
Sample B Female 60.9
Sample C Male 51.1
Sample D Male 39.9
Subiculum
nTPM: 37.2
Samples: 4

Max nTPM: 54.4
Min nTPM: 30.5
Sample A Female 54.4
Sample B Female 33.5
Sample C Male 30.5
Sample D Male 30.5
Ventral hippocampus
nTPM: 30.1
Samples: 4

Max nTPM: 33.2
Min nTPM: 27.3
Sample A Female 33.2
Sample B Female 27.4
Sample C Male 32.4
Sample D Male 27.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 17.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 17.5
Samples: 4

Max nTPM: 19.1
Min nTPM: 16.2
Sample A Male 16.2
Sample B Male 19.1
Sample C Female 17.7
Sample D Female 16.9
Hippocampal formation
nTPM: 17.3
Samples: 4

Max nTPM: 19.5
Min nTPM: 16.1
Sample A Male 19.5
Sample B Male 16.8
Sample C Female 16.1
Sample D Female 16.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.6
68637886 Antisense, RP_050126_01_G12, Mouse strain C57BL/6J (56 days, male) 0.6

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.