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TISSUE PRIMARY DATA VAGINA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Vagina
Tissue proteome
Vagina
VAGINA - Expression summary
Protein expression
Vaginai

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Squamous epithelial cells: Medium
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:117.5 nTPM
GTEx:117.5 nTPM
FANTOM5:67.7 Scaled Tags Per Million

VAGINA - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA010811Antibody HPA010859
Squamous epithelial cells MediumLow

VAGINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 117.5
GTEx sample id Sample description nTPM
Vagina
Average nTPM: 117.5
Samples: 156

Max nTPM: 231.7
Min nTPM: 77.6
Std nTPM: 22.6
Median nTPM: 116.0
GTEX-14JG6-0726-SM-69LQH 30-39 years, female 231.7
GTEX-1JMQL-2326-SM-CNNPV 50-59 years, female 180.8
GTEX-1F5PL-1826-SM-7P8PP 40-49 years, female 177.1
GTEX-11EMC-1926-SM-5A5JU 60-69 years, female 166.5
GTEX-WEY5-0826-SM-4LMIH 40-49 years, female 163.0
GTEX-Y114-1926-SM-4TT8J 50-59 years, female 162.5
GTEX-1LVAM-1926-SM-E6CIM 50-59 years, female 159.7
GTEX-1S5ZU-2626-SM-E9TII 20-29 years, female 156.5
GTEX-1A8FM-2426-SM-7IGPE 50-59 years, female 156.0
GTEX-X8HC-2826-SM-46MWJ 50-59 years, female 155.5
GTEX-15ER7-2526-SM-7KUFW 20-29 years, female 147.7
GTEX-1NUQO-1826-SM-E6CQU 20-29 years, female 145.3
GTEX-14PJ6-1626-SM-6872D 60-69 years, female 144.2
GTEX-11VI4-0726-SM-5GU5B 40-49 years, female 144.1
GTEX-ZYVF-0326-SM-5GIES 50-59 years, female 143.3
GTEX-XUZC-1226-SM-4BRVJ 30-39 years, female 142.5
GTEX-S7SF-1426-SM-4AT5A 20-29 years, female 141.8
GTEX-1JN76-1526-SM-CNPPF 20-29 years, female 141.6
GTEX-S4UY-1326-SM-4AD4X 40-49 years, female 141.5
GTEX-13D11-1326-SM-5IJFY 50-59 years, female 139.8
GTEX-ZP4G-0826-SM-4WWF3 20-29 years, female 139.7
GTEX-ZV6S-1326-SM-59HJA 40-49 years, female 139.6
GTEX-1I4MK-1726-SM-ARL7O 50-59 years, female 139.6
GTEX-11I78-2026-SM-5987C 50-59 years, female 138.0
GTEX-1J8EW-2526-SM-CKZO2 60-69 years, female 138.0
GTEX-Y8LW-1426-SM-5RQJJ 50-59 years, female 137.3
GTEX-1QP28-1426-SM-EVR4E 50-59 years, female 137.3
GTEX-12WSD-2926-SM-5LZUH 60-69 years, female 137.2
GTEX-ZZPU-2226-SM-5EGIV 50-59 years, female 136.6
GTEX-QCQG-1226-SM-48U23 50-59 years, female 134.8
GTEX-14PKU-1326-SM-6871B 40-49 years, female 134.3
GTEX-14AS3-1726-SM-5RQJV 40-49 years, female 133.3
GTEX-UJHI-1326-SM-4IHJO 50-59 years, female 133.1
GTEX-1117F-2526-SM-5GZY6 60-69 years, female 133.0
GTEX-145ME-1426-SM-5RQJS 40-49 years, female 132.9
GTEX-WRHU-2926-SM-4MVNQ 50-59 years, female 132.9
GTEX-1LNCM-1026-SM-E9U5D 50-59 years, female 132.2
GTEX-ZQG8-1126-SM-51MRL 60-69 years, female 132.0
GTEX-11TTK-2726-SM-5GU58 60-69 years, female 131.9
GTEX-ZLWG-1126-SM-4WWFQ 50-59 years, female 131.6
GTEX-12WSJ-1326-SM-5GCOB 40-49 years, female 131.4
GTEX-11DXX-1726-SM-5H11T 60-69 years, female 130.4
GTEX-1QPFJ-1626-SM-DTX7X 30-39 years, female 130.2
GTEX-RU1J-1426-SM-46MUV 20-29 years, female 129.4
GTEX-1HBPM-2726-SM-9WYUA 60-69 years, female 128.7
GTEX-1AMFI-1526-SM-73KVY 50-59 years, female 128.6
GTEX-16NGA-1626-SM-72D6M 40-49 years, female 128.5
GTEX-1MCYP-1326-SM-EV7AD 20-29 years, female 128.4
GTEX-131XG-2126-SM-5DUXG 50-59 years, female 127.8
GTEX-14PN3-1626-SM-6AJAV 60-69 years, female 127.5
GTEX-YFC4-2926-SM-5IFJ8 40-49 years, female 126.9
GTEX-1LVAN-1626-SM-CNPQ7 50-59 years, female 126.8
GTEX-T2IS-1926-SM-4DM74 20-29 years, female 126.6
GTEX-18D9A-1026-SM-7KFRU 30-39 years, female 125.4
GTEX-PX3G-2526-SM-48TZV 20-29 years, female 125.1
GTEX-W5WG-1026-SM-4LMIF 50-59 years, female 125.1
GTEX-XUW1-0326-SM-4BOOR 50-59 years, female 124.6
GTEX-13QBU-1726-SM-5IJFQ 40-49 years, female 124.1
GTEX-TMMY-1926-SM-4DXUU 40-49 years, female 123.8
GTEX-ZGAY-2226-SM-4YCCX 40-49 years, female 123.5
GTEX-15SDE-1726-SM-6LPJS 50-59 years, female 123.4
GTEX-17JCI-2526-SM-7DHLB 60-69 years, female 123.1
GTEX-TSE9-2526-SM-4DXUS 60-69 years, female 122.6
GTEX-X15G-1926-SM-4PQZQ 50-59 years, female 122.6
GTEX-18A7A-2826-SM-7LT8J 50-59 years, female 121.3
GTEX-1J1OQ-1826-SM-CL53R 40-49 years, female 121.2
GTEX-XV7Q-1626-SM-4BRWC 40-49 years, female 119.7
GTEX-P78B-2226-SM-3P5ZZ 40-49 years, female 119.1
GTEX-Q734-1426-SM-DTXFX 40-49 years, female 119.0
GTEX-1399U-1526-SM-5J2N7 50-59 years, female 118.5
GTEX-QVJO-2526-SM-CYPRA 60-69 years, female 118.4
GTEX-OHPL-2526-SM-3MJGT 60-69 years, female 118.2
GTEX-1CAMS-2326-SM-793CR 40-49 years, female 117.7
GTEX-11GSP-2226-SM-5HL5Q 60-69 years, female 117.6
GTEX-SE5C-1126-SM-4BRWZ 40-49 years, female 117.6
GTEX-11P81-2126-SM-5HL6N 30-39 years, female 117.4
GTEX-YJ8O-1226-SM-5P9JE 40-49 years, female 116.3
GTEX-1HBPH-2926-SM-9WPNX 40-49 years, female 116.3
GTEX-N7MT-1926-SM-3LK5N 60-69 years, female 115.7
GTEX-PWCY-1726-SM-48TD3 20-29 years, female 115.6
GTEX-Y3IK-2226-SM-4YCD4 50-59 years, female 115.1
GTEX-U3ZN-0926-SM-4DXTU 30-39 years, female 114.9
GTEX-113JC-1926-SM-5N9GE 50-59 years, female 114.6
GTEX-OHPK-2526-SM-3MJH9 50-59 years, female 114.4
GTEX-ZVT2-0626-SM-5GICR 50-59 years, female 114.4
GTEX-S341-1226-SM-4AD5S 40-49 years, female 111.6
GTEX-146FR-2426-SM-5NQAU 60-69 years, female 111.3
GTEX-1GN1W-1526-SM-7P8TG 50-59 years, female 111.0
GTEX-11EM3-1826-SM-5A5KO 20-29 years, female 110.7
GTEX-T6MO-1226-SM-4DM5S 40-49 years, female 110.3
GTEX-1LH75-1726-SM-DHXKZ 50-59 years, female 110.2
GTEX-13QIC-1826-SM-5J1MY 60-69 years, female 110.1
GTEX-14A5I-2726-SM-5SIB3 50-59 years, female 110.0
GTEX-1HCUA-1026-SM-A9SMI 50-59 years, female 109.8
GTEX-1IDJU-1026-SM-AHZ2U 60-69 years, female 109.7
GTEX-ZTPG-2226-SM-57WF9 20-29 years, female 108.7
GTEX-ZYY3-2626-SM-5N9DH 60-69 years, female 108.4
GTEX-QDT8-2526-SM-48TYX 30-39 years, female 108.2
GTEX-11XUK-1326-SM-5EQM4 40-49 years, female 107.8
GTEX-OHPN-2426-SM-E9TI5 60-69 years, female 107.6
GTEX-ZC5H-2226-SM-4WAWS 40-49 years, female 106.8
GTEX-17F9Y-2326-SM-7DUFP 70-79 years, female 106.7
GTEX-1GF9U-1926-SM-7P8TZ 40-49 years, female 106.5
GTEX-13PL7-2726-SM-5L3GB 60-69 years, female 105.6
GTEX-1EWIQ-2326-SM-7IGNF 70-79 years, female 104.3
GTEX-WYVS-1426-SM-4ONCV 40-49 years, female 104.0
GTEX-P4PP-2526-SM-3P61P 30-39 years, female 103.4
GTEX-16NPV-2526-SM-6M483 50-59 years, female 103.2
GTEX-15SHU-2926-SM-7KUKT 40-49 years, female 102.6
GTEX-12ZZX-1926-SM-5EGKC 40-49 years, female 102.5
GTEX-PWN1-2526-SM-48TDS 40-49 years, female 102.2
GTEX-ZVT3-2726-SM-5GU5X 60-69 years, female 102.1
GTEX-13OVI-0926-SM-5J1MI 60-69 years, female 101.9
GTEX-146FH-2626-SM-5Q5E1 50-59 years, female 101.9
GTEX-1MCC2-1126-SM-EVYD6 30-39 years, female 101.9
GTEX-13PVR-1426-SM-5S2PW 60-69 years, female 101.2
GTEX-1PIEJ-1926-SM-EVYB7 20-29 years, female 100.3
GTEX-1GMR8-2526-SM-7RHI9 50-59 years, female 100.0
GTEX-RWS6-1726-SM-47JXP 60-69 years, female 99.7
GTEX-14PJM-2926-SM-69LOE 50-59 years, female 99.4
GTEX-S4P3-1126-SM-4AD52 50-59 years, female 99.4
GTEX-14H4A-2426-SM-664OQ 40-49 years, female 99.2
GTEX-15SB6-1426-SM-7KUEM 50-59 years, female 99.2
GTEX-1LGRB-2126-SM-COH48 50-59 years, female 98.2
GTEX-1C475-0526-SM-793AC 40-49 years, female 97.4
GTEX-1HCU6-2326-SM-ACKXP 60-69 years, female 97.0
GTEX-ZAK1-2426-SM-EXOHM 50-59 years, female 96.9
GTEX-1399S-2326-SM-5K7YV 30-39 years, female 96.8
GTEX-ZE7O-2426-SM-57WD7 50-59 years, female 96.4
GTEX-131YS-2426-SM-5J2OD 60-69 years, female 95.7
GTEX-15UF6-2126-SM-6M46Z 70-79 years, female 95.5
GTEX-13U4I-2026-SM-5LU3L 40-49 years, female 95.2
GTEX-SN8G-2626-SM-EXUQT 50-59 years, female 95.1
GTEX-1HCU8-2026-SM-9YFLE 60-69 years, female 95.0
GTEX-TML8-1126-SM-4DXSS 40-49 years, female 94.3
GTEX-13W3W-2326-SM-5LU4Y 60-69 years, female 93.3
GTEX-1IE54-2626-SM-CMKFY 40-49 years, female 93.0
GTEX-PLZ4-2726-SM-3P61A 50-59 years, female 92.1
GTEX-1R9JW-1426-SM-DTX9K 30-39 years, female 92.0
GTEX-1I1GT-1226-SM-B2LVK 60-69 years, female 91.4
GTEX-15DYW-2926-SM-6PANA 60-69 years, female 91.2
GTEX-145LS-2526-SM-5TDC9 60-69 years, female 90.7
GTEX-13N11-1526-SM-5L3FL 50-59 years, female 90.1
GTEX-14BMU-1926-SM-5S2QC 20-29 years, female 90.1
GTEX-ZXES-0626-SM-5E45P 30-39 years, female 89.7
GTEX-1LGOU-1126-SM-D3LAI 20-29 years, female 89.0
GTEX-183WM-2126-SM-7LG4I 70-79 years, female 88.7
GTEX-1HFI7-1126-SM-A96S5 50-59 years, female 88.5
GTEX-1JN1M-2326-SM-ARZNG 60-69 years, female 87.0
GTEX-1QCLZ-2226-SM-DTX7R 60-69 years, female 84.3
GTEX-1GN1U-2426-SM-9KNTU 50-59 years, female 83.9
GTEX-NPJ7-2526-SM-EV79A 60-69 years, female 82.0
GTEX-147F3-1526-SM-5SIAK 50-59 years, female 81.5
GTEX-1F48J-2526-SM-7P8TU 50-59 years, female 81.1
GTEX-14DAQ-2326-SM-5S2QX 60-69 years, female 80.9
GTEX-1ICG6-1626-SM-ARL81 70-79 years, female 77.6
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VAGINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 67.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Vagina
Scaled Tags Per Million: 67.7
FF:10204-103F6 68 years, female 67.7

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