HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:14.6 nTPM
HPA:14.6 nTPM
GTEx:52.4 nTPM
FANTOM5:55.9 Scaled Tags Per Million
Pig:10.6 nTPM
Mouse:0.0 nTPM
Allen mouse:0.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA074572
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 14.6
Sample id Sample description nTPM
Hippocampus
nTPM: 14.6
1898 Male, age 80, left hemisphere 19.7
2621 Female, age 67, right hemisphere 15.3
1911 Female, age 85, right hemisphere 14.1
1855 Male, age 76, left hemisphere 13.7
2529 Female, age 94, left hemisphere 12.8
2148 Female, age 91, left hemisphere 12.3
Dentate gyrus
nTPM: 14.6
2010 Male, age 76, both hemispheres 21.2
2531 Female, age 67, both hemispheres 14.8
2528 Male, age 74, both hemispheres 14.5
2530 Female, age 94, left hemisphere 12.7
2246 Female, age 85, both hemispheres 12.4
1927 Female, age 91, both hemispheres 12.1
Entorhinal gyrus
nTPM: 13.5
2117 Female, age 91, right hemisphere 15.6
1787 Male, age 76, left hemisphere 14.5
2686 Male, age 75, right hemisphere 13.2
2613 Female, age 94, left hemisphere 12.8
2764 Male, age 80, right hemisphere 12.6
1938 Female, age 85, left hemisphere 12.5
Hippocampus, CA1
nTPM: 14.5
2045 Male, age 76, both hemispheres 18.6
1873 Female, age 85, both hemispheres 14.3
2749 Male, age 80, left hemisphere 14.3
2082 Female, age 91, right hemisphere 14.2
2527 Male, age 74, both hemispheres 11.2
Hippocampus, CA2
nTPM: 14.4
1940 Female, age 85, left hemisphere 18.6
1892 Male, age 76, both hemispheres 15.0
2113 Female, age 91, right hemisphere 13.7
2249 Male, age 74, both hemispheres 13.6
1963 Male, age 80, left hemisphere 12.8
2437 Female, age 94, left hemisphere 12.5
Hippocampus, CA3
nTPM: 13.7
1867 Male, age 76, both hemispheres 15.7
2137 Male, age 80, left hemisphere 15.0
2436 Male, age 74, both hemispheres 13.8
1891 Female, age 85, both hemispheres 13.0
2620 Female, age 94, left hemisphere 12.4
2861 Female, age 67, both hemispheres 12.4
Parahippocampal cortex
nTPM: 13.8
2018 Male, age 76, both hemispheres 24.9
2250 Female, age 67, right hemisphere 15.3
1850 Male, age 80, both hemispheres 14.2
2693 Female, age 94, both hemispheres 12.9
2245 Female, age 91, both hemispheres 12.6
1933 Female, age 85, both hemispheres 12.4
1990 Female, age 91, right hemisphere 12.3
2622 Female, age 67, right hemisphere 11.7
2532 Female, age 72, left hemisphere 11.3
2692 Male, age 74, both hemispheres 10.6
Perirhinal gyrus
nTPM: 13.3
1841 Female, age 85, right hemisphere 15.0
2521 Female, age 94, right hemisphere 13.8
1794 Male, age 80, right hemisphere 13.1
2848 Male, age 76, right hemisphere 12.8
1847 Female, age 91, left hemisphere 11.9
Subiculum
nTPM: 14.2
2042 Male, age 76, both hemispheres 17.0
1901 Male, age 80, both hemispheres 16.4
2729 Female, age 91, right hemisphere 15.0
2619 Male, age 74, both hemispheres 12.5
2438 Female, age 94, left hemisphere 12.3
1977 Female, age 85, both hemispheres 12.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 52.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 52.4
Samples: 197

Max nTPM: 584.8
Min nTPM: 0.2
Std nTPM: 82.1
Median nTPM: 22.3
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 584.8
GTEX-17EVQ-0011-R1a-SM-7189S 70-79 years, male 467.3
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 446.6
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 365.7
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 359.7
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 259.1
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 258.3
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 237.1
GTEX-16XZZ-0011-R1a-SM-7LTAH 60-69 years, male 207.3
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 200.7
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 177.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 55.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 55.9
FF:10169-103B7 60 years, female 77.4
FF:10153-102I9 76 years, female 34.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 10.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 9.7
Samples: 4

Max nTPM: 16.6
Min nTPM: 3.6
Sample A Female 10.1
Sample B Female 8.6
Sample C Male 16.6
Sample D Male 3.6
Entorhinal cortex
nTPM: 5.6
Samples: 4

Max nTPM: 10.3
Min nTPM: 1.7
Sample A Female 10.3
Sample B Female 4.6
Sample C Male 5.8
Sample D Male 1.7
Subiculum
nTPM: 10.0
Samples: 4

Max nTPM: 13.6
Min nTPM: 6.9
Sample A Female 6.9
Sample B Female 6.9
Sample C Male 12.6
Sample D Male 13.6
Ventral hippocampus
nTPM: 10.7
Samples: 4

Max nTPM: 16.8
Min nTPM: 7.1
Sample A Female 7.2
Sample B Female 7.1
Sample C Male 11.5
Sample D Male 16.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 0.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 0.0
Samples: 4

Max nTPM: 0.0
Min nTPM: 0.0
Sample A Male 0.0
Sample B Male 0.0
Sample C Female 0.0
Sample D Female 0.0
Hippocampal formation
nTPM: 0.0
Samples: 4

Max nTPM: 0.0
Min nTPM: 0.0
Sample A Male 0.0
Sample B Male 0.0
Sample C Female 0.0
Sample D Female 0.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.3
68744516 Antisense, RP_050208_01_A10, Mouse strain C57BL/6J (56 days, male) 0.3

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