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NDUFB2
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  • NDUFB2
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Medium
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:347.1 nTPM
FANTOM5:82.9 Scaled Tags Per Million
Pig:23.1 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA051377
Glial cells Medium
Neuronal cells Not detected



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 347.1
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 347.1
Samples: 246

Max nTPM: 896.3
Min nTPM: 180.1
Std nTPM: 110.3
Median nTPM: 320.4
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 896.3
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 886.4
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 824.9
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 791.8
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 662.9
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 656.9
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 655.6
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 643.6
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 633.5
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 586.1
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 585.7
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 578.4
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 550.9
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 544.6
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 540.9
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 530.2
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 527.0
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 501.8
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 500.6
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 494.3
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 484.7
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 480.0
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 475.3
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 475.2
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 466.9
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 461.7
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 458.0
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 456.1
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 454.7
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 452.8
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 449.0
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 448.9
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 447.8
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 442.3
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 439.1
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 436.7
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 434.2
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 428.7
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 426.9
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 423.2
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 422.4
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 419.7
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 414.7
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 412.8
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 410.7
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 409.2
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 408.0
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 407.6
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 406.9
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 404.2
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 402.6
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 399.7
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 394.7
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 394.6
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 392.5
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 391.3
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 389.4
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 388.9
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 388.2
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 385.4
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 383.3
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 380.5
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 380.1
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 378.2
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 376.0
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 375.5
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 375.2
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 371.7
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 370.7
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 370.4
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 370.2
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 369.4
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 367.6
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 367.4
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 363.4
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 363.3
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 359.0
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 357.2
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 356.4
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 356.4
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 355.2
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 354.5
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 354.3
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 353.5
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 353.4
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 353.0
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 350.7
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 350.1
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 348.0
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 347.1
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 345.5
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 344.7
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 343.8
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 343.8
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 343.1
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 342.6
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 341.9
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 340.2
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 339.0
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 338.9
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 337.1
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 334.2
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 333.6
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 333.3
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 332.8
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 332.2
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 332.1
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 332.0
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 331.8
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 331.2
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 330.7
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 329.4
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 328.1
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 327.3
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 326.2
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 325.8
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 325.5
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 324.1
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 323.7
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 323.4
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 323.3
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 321.0
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 321.0
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 319.8
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 318.9
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 318.6
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 318.3
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 317.8
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 317.5
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 317.3
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 316.5
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 313.1
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 313.0
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 312.8
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 311.8
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 311.8
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 311.6
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 311.3
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 310.9
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 310.9
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 310.6
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 309.6
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 309.3
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 309.1
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 308.3
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 308.2
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 307.7
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 306.8
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 306.8
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 306.6
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 306.2
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 304.3
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 304.3
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 304.2
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 304.1
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 303.8
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 303.4
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 303.2
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 303.0
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 302.6
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 302.5
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 302.2
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 301.3
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 300.7
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 299.7
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 299.2
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 299.1
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 298.4
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 297.5
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 297.5
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 296.2
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 294.9
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 294.5
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 293.8
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 291.9
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 290.0
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 289.8
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 288.8
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 288.4
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 287.7
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 286.7
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 286.2
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 285.2
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 284.6
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 284.2
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 281.6
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 281.1
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 280.9
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 279.6
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 278.0
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 277.5
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 276.9
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 275.7
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 272.9
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 272.9
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 272.7
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 269.8
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 269.4
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 268.7
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 268.0
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 266.8
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 265.0
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 264.4
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 263.4
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 261.7
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 261.5
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 260.1
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 259.5
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 258.3
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 256.4
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 255.9
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 255.5
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 253.0
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 251.7
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 251.5
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 251.4
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 250.7
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 250.5
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 246.4
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 244.9
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 241.2
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 240.9
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 238.9
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 238.4
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 237.9
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 236.2
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 235.0
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 234.8
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 229.0
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 228.9
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 228.1
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 227.5
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 226.5
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 224.2
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 223.7
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 222.1
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 221.8
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 219.8
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 219.6
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 209.3
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 202.7
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 199.3
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 198.5
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 198.4
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 191.1
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 180.1
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 82.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 82.9
FF:10164-103B2 76 years, female 82.9

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 23.1
Pig sample Sample description nTPM
Caudate
nTPM: 23.1
Samples: 4

Max nTPM: 24.2
Min nTPM: 21.9
Sample A Female 21.9
Sample B Female 24.2
Sample C Male 23.0
Sample D Male 23.3

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