COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: Medium
Glandular cells: Medium
Peripheral nerve/ganglion: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:61.6 nTPM
HPA:48.0 nTPM
GTEx:61.6 nTPM
FANTOM5:71.5 Scaled Tags Per Million

COLON - Antibody stainingi
Antibody HPA040436
Endothelial cells Medium
Glandular cells High
Peripheral nerve/ganglion Medium



COLON - HPA RNA-seqi
Average nTPM 48.0
overview
Male, age 54 		Colon sample 67
nTPM: 36
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 38.8
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 34.8
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 32.5
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 44.6
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 54.5
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 68.7
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 53.6
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 54.2
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 62
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 50
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 44.5
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 49.9
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 61.6
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 61.6
Samples: 373

Max nTPM: 145.7
Min nTPM: 33.0
Std nTPM: 17.9
Median nTPM: 57.8
GTEX-15RJ7-1726-SM-6PAL3 40-49 years, male 145.7
GTEX-1399U-2226-SM-5KLZI 50-59 years, female 141.0
GTEX-ZT9W-1726-SM-51MS3 50-59 years, male 137.5
GTEX-ZTSS-1226-SM-51MSZ 40-49 years, male 123.7
GTEX-14E1K-1626-SM-664MO 50-59 years, male 121.3
GTEX-1OFPY-1226-SM-E76OM 60-69 years, male 117.2
GTEX-14PJ4-1826-SM-5YY97 60-69 years, male 115.1
GTEX-1KANA-1726-SM-CY8IG 20-29 years, male 114.5
GTEX-1JK1U-1426-SM-CNPOW 60-69 years, male 113.6
GTEX-WFG8-1726-SM-4LVM6 20-29 years, male 108.8
GTEX-1L5NE-1926-SM-D3L9R 50-59 years, male 107.4
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Colon - Transverse
Average nTPM: 51.8
Samples: 406

Max nTPM: 120.1
Min nTPM: 32.8
Std nTPM: 12.5
Median nTPM: 49.2
GTEX-X5EB-0926-SM-46MVT 40-49 years, male 120.1
GTEX-111YS-1626-SM-5GZZ9 60-69 years, male 119.2
GTEX-T6MO-0826-SM-4DM51 40-49 years, female 111.9
GTEX-12WSL-1626-SM-5GCMU 50-59 years, male 109.5
GTEX-RWS6-1826-SM-47JXX 60-69 years, female 103.7
GTEX-13O61-1626-SM-5KM3T 60-69 years, male 98.6
GTEX-14E1K-1826-SM-793DT 50-59 years, male 96.7
GTEX-13U4I-2426-SM-5LU34 40-49 years, female 90.0
GTEX-YEC4-1926-SM-5IFHJ 40-49 years, male 86.3
GTEX-14PJ5-0926-SM-6LLIK 60-69 years, female 85.3
GTEX-13FH7-1526-SM-5J2N6 50-59 years, female 83.1
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 71.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 71.5
FF:10014-101C5 62,83,84 years, mixed 71.5

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.