COLON - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:21.5 nTPM
HPA:5.2 nTPM
GTEx:21.5 nTPM
FANTOM5:17.1 Scaled Tags Per Million

COLON - Annotated protein expression
Pending normal tissue analysis

COLON - HPA RNA-seqi
Average nTPM 5.2
overview
Male, age 54 		Colon sample 67
nTPM: 3.8
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 3.1
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 3.6
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 6.5
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 8.1
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 6
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 2.9
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 3.1
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 7.7
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 4.1
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 3.8
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 7.6
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 7.2
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 21.5
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 21.5
Samples: 373

Max nTPM: 77.3
Min nTPM: 5.1
Std nTPM: 7.4
Median nTPM: 20.3
GTEX-15RJ7-1726-SM-6PAL3 40-49 years, male 77.3
GTEX-17HG3-1126-SM-7DUFC 30-39 years, female 51.6
GTEX-147GR-2826-SM-5RQK8 60-69 years, male 44.0
GTEX-1P4AB-2626-SM-DTXEU 50-59 years, male 40.8
GTEX-11TUW-2326-SM-5EQMO 60-69 years, male 40.7
GTEX-1IL2U-2526-SM-C1YQV 60-69 years, male 39.0
GTEX-1JN6P-2126-SM-ARL98 60-69 years, male 39.0
GTEX-13OW6-2226-SM-5N9FL 50-59 years, male 37.6
GTEX-132NY-2726-SM-5PNY2 60-69 years, male 37.2
GTEX-11P81-1426-SM-5P9JN 30-39 years, female 36.8
GTEX-1GMRU-2626-SM-9WPPM 50-59 years, male 36.5
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Colon - Transverse
Average nTPM: 15.1
Samples: 406

Max nTPM: 42.2
Min nTPM: 3.2
Std nTPM: 7.9
Median nTPM: 14.1
GTEX-1K9T9-2826-SM-D4P3F 50-59 years, female 42.2
GTEX-1S5VW-2926-SM-E9U6H 60-69 years, male 38.3
GTEX-147JS-2526-SM-5S2Q8 60-69 years, male 37.6
GTEX-11TTK-2426-SM-5PNYO 60-69 years, female 36.2
GTEX-SJXC-2226-SM-EVYAK 60-69 years, male 36.1
GTEX-13OVI-2026-SM-5J1MU 60-69 years, female 35.9
GTEX-1JMLX-2726-SM-CM2SB 50-59 years, male 34.0
GTEX-15CHQ-2526-SM-6EU24 60-69 years, male 33.6
GTEX-ZYVF-2826-SM-5GIDK 50-59 years, female 33.4
GTEX-1E2YA-2626-SM-7MGWW 50-59 years, male 33.0
GTEX-13OW5-2626-SM-5MR3M 60-69 years, male 32.7
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 17.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 17.1
FF:10014-101C5 62,83,84 years, mixed 17.1

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.