We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
AARS1
SECTIONS
  • TISSUE
  • BRAIN
  • SINGLE CELL TYPE
  • TISSUE CELL TYPE
  • PATHOLOGY
  • DISEASE
  • IMMUNE CELL
  • BLOOD PROTEIN
  • SUBCELLULAR
  • CELL LINE
  • STRUCTURE
  • METABOLIC
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
  • SARS-COV-2
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Patient ID
Tissue
Category
Cluster
Reliability
Brain region
Category
Brain region
Category
Brain region
Category
Reliability
Cell type
Category
Cluster
Tissue
Cell type
Enrichment
Cancer
Prognosis
Cancer
Category
Cell type
Category
Cell lineage
Category
Cluster
Annotation
Disease
Location
Searches
Location
Cell line
Type
Phase
Reliability
Cancer type
Category
Cluster
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Protein structure
In atlas
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • TISSUE CELL

  • PATHOLOGY

  • DISEASE

  • IMMUNE

  • BLOOD

  • SUBCELL

  • CELL LINE

  • STRUCTURE

  • METABOLIC

  • AARS1
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:74.2 nTPM
FANTOM5:131.8 Scaled Tags Per Million
Pig:36.7 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA040870Antibody CAB034261
Glial cells Not detectedNot detected
Neuronal cells MediumMedium





CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 74.2
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 74.2
Samples: 246

Max nTPM: 111.8
Min nTPM: 46.4
Std nTPM: 13.0
Median nTPM: 73.3
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 111.8
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 109.9
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 105.2
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 104.8
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 103.9
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 103.2
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 103.0
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 101.5
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 100.7
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 100.3
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 100.2
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 99.7
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 99.2
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 99.2
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 96.1
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 95.0
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 93.8
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 93.8
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 93.6
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 93.2
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 92.8
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 92.3
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 91.5
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 91.4
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 91.1
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 90.9
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 90.6
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 90.6
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 90.5
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 90.5
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 90.2
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 90.0
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 89.7
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 89.6
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 89.5
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 89.4
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 89.3
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 88.9
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 88.8
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 88.5
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 88.4
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 88.2
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 87.0
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 87.0
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 86.5
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 85.6
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 85.5
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 84.8
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 84.7
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 84.7
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 84.6
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 83.9
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 83.8
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 83.7
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 83.4
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 83.3
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 83.2
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 83.2
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 82.9
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 82.4
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 82.4
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 82.3
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 82.2
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 81.8
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 81.7
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 81.6
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 81.5
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 81.0
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 81.0
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 81.0
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 80.8
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 80.7
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 80.7
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 80.6
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 80.5
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 80.5
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 80.5
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 80.5
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 79.9
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 79.7
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 79.7
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 79.6
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 79.4
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 79.4
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 79.2
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 79.1
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 79.1
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 79.1
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 78.7
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 78.5
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 78.5
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 78.2
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 77.6
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 77.4
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 77.4
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 76.9
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 76.7
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 76.7
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 76.7
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 76.6
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 76.6
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 76.3
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 76.2
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 75.8
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 75.7
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 75.6
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 75.6
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 75.6
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 75.6
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 75.3
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 75.2
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 75.0
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 75.0
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 74.6
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 74.6
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 74.5
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 74.1
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 74.0
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 74.0
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 73.8
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 73.6
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 73.4
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 73.3
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 73.3
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 73.3
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 73.2
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 72.9
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 72.8
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 72.5
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 72.3
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 71.8
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 71.7
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 71.7
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 71.7
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 71.7
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 71.2
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 70.9
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 70.9
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 70.9
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 70.8
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 70.7
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 70.7
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 70.6
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 70.6
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 70.5
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 70.2
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 70.1
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 69.9
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 69.9
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 69.7
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 69.4
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 69.3
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 69.2
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 68.9
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 68.9
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 68.8
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 68.3
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 68.1
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 68.1
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 67.6
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 67.5
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 67.4
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 67.3
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 67.2
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 67.2
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 67.1
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 66.8
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 66.8
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 66.8
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 66.7
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 66.2
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 65.7
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 65.2
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 65.2
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 65.2
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 65.1
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 65.0
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 64.8
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 64.6
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 64.6
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 64.6
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 64.5
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 64.4
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 64.3
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 64.3
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 64.3
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 63.9
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 63.9
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 63.9
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 63.8
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 63.7
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 63.2
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 63.2
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 63.1
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 62.8
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 62.7
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 62.6
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 62.4
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 62.3
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 62.2
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 61.7
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 61.7
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 61.5
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 61.5
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 61.4
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 61.3
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 61.1
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 61.0
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 61.0
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 60.9
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 60.9
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 60.7
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 60.7
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 60.6
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 60.4
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 60.4
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 60.3
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 60.1
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 60.1
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 59.2
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 58.9
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 58.9
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 58.3
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 57.7
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 57.5
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 57.0
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 57.0
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 56.4
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 56.2
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 56.1
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 56.0
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 54.9
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 54.7
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 53.9
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 53.7
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 53.3
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 53.1
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 53.0
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 52.6
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 52.0
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 52.0
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 50.6
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 49.6
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 46.7
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 46.6
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 46.4
Show allShow less

CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 131.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 131.8
FF:10164-103B2 76 years, female 131.8

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 36.7
Pig sample Sample description nTPM
Caudate
nTPM: 36.7
Samples: 4

Max nTPM: 43.6
Min nTPM: 30.3
Sample A Female 30.3
Sample B Female 37.6
Sample C Male 43.6
Sample D Male 35.4

Contact

  • NEWS ARTICLES
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.