COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: Medium
Glandular cells: Medium
Peripheral nerve/ganglion: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:24.5 nTPM
HPA:6.8 nTPM
GTEx:24.5 nTPM
FANTOM5:13.7 Scaled Tags Per Million

COLON - Antibody stainingi
Antibody HPA017973Antibody HPA048054
Endothelial cells Medium-
Glandular cells MediumNot detected
Peripheral nerve/ganglion Medium-



COLON - HPA RNA-seqi
Average nTPM 6.8
overview
Male, age 54 		Colon sample 67
nTPM: 5.4
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 3.7
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 6.5
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 5.8
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 8.6
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 11.1
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 5.2
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 6.1
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 9.1
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 2.9
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 5.7
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 5.8
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 12
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 24.5
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 24.5
Samples: 373

Max nTPM: 113.5
Min nTPM: 5.0
Std nTPM: 9.4
Median nTPM: 23.7
GTEX-1H1DE-1626-SM-9KNU5 20-29 years, male 113.5
GTEX-ZVZQ-2626-SM-59HLB 60-69 years, female 58.9
GTEX-13X6I-2726-SM-5Q5ET 60-69 years, male 48.0
GTEX-13OW6-2226-SM-5N9FL 50-59 years, male 46.6
GTEX-1HKZK-2026-SM-9WYUF 40-49 years, male 46.3
GTEX-18A6Q-2226-SM-7LG61 60-69 years, male 45.9
GTEX-XQ8I-2326-SM-4BOQC 50-59 years, male 44.1
GTEX-X15G-1526-SM-4PQZM 50-59 years, female 42.6
GTEX-1RDX4-1926-SM-E6CJJ 50-59 years, female 41.9
GTEX-1IL2U-2526-SM-C1YQV 60-69 years, male 41.5
GTEX-1I1CD-2826-SM-A9SL4 60-69 years, female 41.1
Show allShow less
Colon - Transverse
Average nTPM: 16.6
Samples: 406

Max nTPM: 54.1
Min nTPM: 3.1
Std nTPM: 8.9
Median nTPM: 15.3
GTEX-13OVG-1426-SM-5K7VP 60-69 years, male 54.1
GTEX-17F9E-1826-SM-7IGMC 50-59 years, male 51.1
GTEX-1IOXB-2626-SM-CJI2N 50-59 years, male 46.4
GTEX-11GSP-1626-SM-5986N 60-69 years, female 41.3
GTEX-17HII-2726-SM-7MGVM 50-59 years, male 41.3
GTEX-XAJ8-0426-SM-47JYJ 40-49 years, male 40.3
GTEX-1H1DG-2226-SM-9WPPC 70-79 years, male 40.3
GTEX-17JCI-2626-SM-7EWE6 60-69 years, female 39.7
GTEX-11O72-2226-SM-5PNW2 40-49 years, male 38.9
GTEX-13OVJ-1726-SM-5IJDZ 50-59 years, female 38.9
GTEX-1IDJD-2226-SM-A96TD 30-39 years, male 38.4
Show allShow less

COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 13.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 13.7
FF:10014-101C5 62,83,84 years, mixed 13.7

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.