HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:33.8 nTPM
HPA:33.8 nTPM
GTEx:38.6 nTPM
FANTOM5:30.0 Scaled Tags Per Million
Pig:4.4 nTPM
Mouse:73.6 nTPM
Allen mouse:8.0 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 33.8
Sample id Sample description nTPM
Hippocampus
nTPM: 30.4
1898 Male, age 80, left hemisphere 33.7
2148 Female, age 91, left hemisphere 31.8
1855 Male, age 76, left hemisphere 30.7
1911 Female, age 85, right hemisphere 29.5
2621 Female, age 67, right hemisphere 29.1
2529 Female, age 94, left hemisphere 27.4
Dentate gyrus
nTPM: 30.7
1927 Female, age 91, both hemispheres 33.3
2530 Female, age 94, left hemisphere 32.3
2531 Female, age 67, both hemispheres 31.1
2010 Male, age 76, both hemispheres 29.8
2528 Male, age 74, both hemispheres 29.2
2246 Female, age 85, both hemispheres 28.7
Entorhinal gyrus
nTPM: 33.8
2613 Female, age 94, left hemisphere 42.2
2686 Male, age 75, right hemisphere 33.8
2764 Male, age 80, right hemisphere 33.3
1787 Male, age 76, left hemisphere 33.1
2117 Female, age 91, right hemisphere 30.2
1938 Female, age 85, left hemisphere 30.1
Hippocampus, CA1
nTPM: 31.4
2749 Male, age 80, left hemisphere 40.0
2082 Female, age 91, right hemisphere 31.7
1873 Female, age 85, both hemispheres 29.2
2045 Male, age 76, both hemispheres 28.3
2527 Male, age 74, both hemispheres 28.0
Hippocampus, CA2
nTPM: 30.0
1892 Male, age 76, both hemispheres 32.7
1963 Male, age 80, left hemisphere 32.1
2249 Male, age 74, both hemispheres 29.4
2437 Female, age 94, left hemisphere 29.4
2113 Female, age 91, right hemisphere 28.7
1940 Female, age 85, left hemisphere 27.5
Hippocampus, CA3
nTPM: 31.7
2620 Female, age 94, left hemisphere 34.9
2861 Female, age 67, both hemispheres 34.6
2137 Male, age 80, left hemisphere 34.0
1867 Male, age 76, both hemispheres 30.8
2436 Male, age 74, both hemispheres 28.8
1891 Female, age 85, both hemispheres 27.1
Parahippocampal cortex
nTPM: 30.8
2622 Female, age 67, right hemisphere 33.9
1933 Female, age 85, both hemispheres 33.1
2693 Female, age 94, both hemispheres 32.2
1990 Female, age 91, right hemisphere 31.2
2250 Female, age 67, right hemisphere 31.2
2245 Female, age 91, both hemispheres 30.4
1850 Male, age 80, both hemispheres 30.3
2018 Male, age 76, both hemispheres 29.4
2692 Male, age 74, both hemispheres 28.5
2532 Female, age 72, left hemisphere 27.3
Perirhinal gyrus
nTPM: 31.7
1847 Female, age 91, left hemisphere 36.3
1794 Male, age 80, right hemisphere 32.4
2521 Female, age 94, right hemisphere 32.0
1841 Female, age 85, right hemisphere 29.5
2848 Male, age 76, right hemisphere 28.3
Subiculum
nTPM: 28.6
1977 Female, age 85, both hemispheres 31.1
1901 Male, age 80, both hemispheres 30.5
2619 Male, age 74, both hemispheres 29.7
2729 Female, age 91, right hemisphere 29.1
2042 Male, age 76, both hemispheres 25.6
2438 Female, age 94, left hemisphere 25.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 38.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 38.6
Samples: 197

Max nTPM: 86.8
Min nTPM: 10.4
Std nTPM: 13.6
Median nTPM: 38.3
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 86.8
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 84.7
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 76.1
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 71.8
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 68.2
GTEX-11GS4-0011-R1a-SM-DO129 60-69 years, male 64.9
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 64.3
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 64.3
GTEX-12WSD-0011-R1b-SM-5LZVY 60-69 years, female 64.0
GTEX-13OW7-0011-R1b-SM-5L3HF 50-59 years, male 63.6
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 62.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 30.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 30.0
FF:10153-102I9 76 years, female 31.8
FF:10169-103B7 60 years, female 28.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 4.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 4.2
Samples: 4

Max nTPM: 4.9
Min nTPM: 3.5
Sample A Female 4.0
Sample B Female 4.2
Sample C Male 3.5
Sample D Male 4.9
Entorhinal cortex
nTPM: 4.4
Samples: 4

Max nTPM: 5.0
Min nTPM: 3.7
Sample A Female 3.9
Sample B Female 4.9
Sample C Male 3.7
Sample D Male 5.0
Subiculum
nTPM: 4.1
Samples: 4

Max nTPM: 4.5
Min nTPM: 3.8
Sample A Female 4.5
Sample B Female 4.0
Sample C Male 3.8
Sample D Male 4.0
Ventral hippocampus
nTPM: 4.3
Samples: 4

Max nTPM: 4.9
Min nTPM: 3.7
Sample A Female 3.7
Sample B Female 3.8
Sample C Male 4.9
Sample D Male 4.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 73.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 73.6
Samples: 4

Max nTPM: 84.6
Min nTPM: 65.5
Sample A Male 65.5
Sample B Male 84.6
Sample C Female 67.0
Sample D Female 77.3
Hippocampal formation
nTPM: 62.1
Samples: 4

Max nTPM: 63.6
Min nTPM: 60.4
Sample A Male 63.0
Sample B Male 61.2
Sample C Female 60.4
Sample D Female 63.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 8.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 8.0
69012932 Antisense, RP_050309_01_G03, Mouse strain C57BL/6J (56 days, male) 8.0

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