AMYGDALA - Expression summary
Mouse brain, Intensity
Amygdalai 		180.364
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:30.4 nTPM
HPA:30.4 nTPM
GTEx:41.1 nTPM
FANTOM5:80.2 Scaled Tags Per Million
Pig:21.9 nTPM
Mouse:75.3 nTPM
Allen mouse:11.5 Expression energy

AMYGDALA - Mouse brain profilei , antibody HPA025770
Amygdala mean intensity 180.364
intensityi
FRONT BACK
Nucleus of the lateral olfactory tract -
Basal medial amygdaloid nucleus 139.683
Basal lateral amygdala* -
Basal lateral amygdaloid nucleus 108.133
Cortical amygdala 128.980
Central amygdala 93.502
Medial amygdaloid nucleus 131.656

AMYGDALA - HPA Brain RNA-seq
Max nTPM 30.4
Sample id Sample description nTPM
Amygdala
nTPM: 30.4
2514 Male, age 75, right hemisphere 32.1
2814 Male, age 76, right hemisphere 31.4
1987 Female, age 91, left hemisphere 30.3
2517 Female, age 94, left hemisphere 29.7
2695 Female, age 67, right hemisphere 28.6
Basal amygdala
nTPM: 28.7
2110 Male, age 80, left hemisphere 32.4
2609 Male, age 75, right hemisphere 30.8
2243 Female, age 91, right hemisphere 30.4
1955 Male, age 76, both hemispheres 28.0
2685 Female, age 94, left hemisphere 27.4
2827 Female, age 67, right hemisphere 23.0
Central amygdala
nTPM: 28.9
1905 Male, age 76, both hemispheres 31.0
2515 Male, age 75, right hemisphere 29.8
2239 Male, age 80, left hemisphere 29.1
2701 Female, age 91, right hemisphere 28.0
2826 Female, age 94, left hemisphere 26.5
Corticomedial amygdala
nTPM: 29.9
2829 Male, age 80, left hemisphere 33.1
2242 Female, age 91, right hemisphere 32.1
2428 Male, age 75, right hemisphere 31.0
2429 Female, age 94, left hemisphere 30.6
2240 Male, age 76, both hemispheres 27.8
2535 Female, age 67, right hemisphere 24.7
Lateral amygdala
nTPM: 27.9
2516 Male, age 75, right hemisphere 32.6
1883 Male, age 76, both hemispheres 30.7
2534 Female, age 94, left hemisphere 27.3
2255 Female, age 91, right hemisphere 26.7
2256 Male, age 80, left hemisphere 26.1
2830 Female, age 67, right hemisphere 24.0
Stria terminalis, bed nucleus
nTPM: 30.0
1974 Female, age 91, both hemispheres 32.2
2486 Female, age 94, both hemispheres 30.0
2201 Male, age 74, unknown 27.7

AMYGDALA - GTEx RNA-seqi
Average nTPM 41.1
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 41.1
Samples: 152

Max nTPM: 77.6
Min nTPM: 19.1
Std nTPM: 9.7
Median nTPM: 41.7
GTEX-17HG3-0011-R4a-SM-7IGLL 30-39 years, female 77.6
GTEX-1F75A-0011-R4a-SM-ARL8J 50-59 years, male 65.1
GTEX-1JMQJ-0011-R4b-SM-EXUT8 50-59 years, male 62.8
GTEX-TSE9-0011-R4A-SM-3DB7H 60-69 years, female 62.7
GTEX-14E7W-0011-R4b-SM-62LEA 70-79 years, male 62.2
GTEX-14JG1-0011-R4b-SM-62LEB 40-49 years, male 62.0
GTEX-15SHU-0011-R4b-SM-7IGLC 40-49 years, female 61.6
GTEX-T6MN-0011-R4A-SM-32QPG 50-59 years, male 59.4
GTEX-1B8L1-0011-R4a-SM-7EWFJ 60-69 years, male 58.8
GTEX-1J1OQ-0011-R4a-SM-D4P2A 40-49 years, female 57.9
GTEX-1F7RK-0011-R4b-SM-9QEI7 20-29 years, female 57.3
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AMYGDALA - FANTOM5 CAGEi
Max Scaled Tags Per Million 80.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 80.3
FF:10151-102I7 76 years, female 80.2

AMYGDALA - Pig RNA-seqi
Average nTPM 21.9
Pig sample Sample description nTPM
Amygdala
nTPM: 21.9
Samples: 4

Max nTPM: 25.0
Min nTPM: 18.3
Sample A Female 25.0
Sample B Female 22.1
Sample C Male 18.3
Sample D Male 22.3

AMYGDALA - Mouse RNA-seqi
Average nTPM 75.3
Mouse sample Sample description nTPM
Amygdala
nTPM: 75.3
Samples: 4

Max nTPM: 79.6
Min nTPM: 70.2
Sample A Male 79.6
Sample B Male 73.5
Sample C Female 77.9
Sample D Female 70.2

AMYGDALA - Allen Mouse ISHi
Max Expression energy 11.5
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 11.5
355890 Antisense, RP_040617_01_F08, Mouse strain C57BL/6J (56 days, male) 11.5
67936414 Antisense, RP_040617_01_F08, Mouse strain C57BL/6J (56 days, male) 7.0

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.