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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:133.9 nTPM
FANTOM5:132.4 Scaled Tags Per Million
Pig:101.7 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA001527Antibody HPA005692Antibody CAB009538
Glial cells Not detectedNot detectedNot detected
Neuronal cells LowLowLow






CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 133.9
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 133.9
Samples: 246

Max nTPM: 606.2
Min nTPM: 30.2
Std nTPM: 79.5
Median nTPM: 117.4
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 606.2
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 573.9
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 496.4
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 336.8
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 315.1
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 303.9
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 299.1
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 296.5
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 288.8
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 286.8
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 286.4
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 284.0
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 281.4
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 280.1
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 277.5
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 265.9
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 264.7
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 256.1
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 243.2
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 242.0
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 236.9
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 234.3
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 231.7
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 231.5
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 231.1
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 230.4
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 229.1
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 227.3
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 226.9
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 221.1
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 219.0
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 211.5
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 210.0
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 209.9
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 209.7
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 205.9
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 205.4
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 202.9
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 199.6
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 197.5
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 197.5
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 194.4
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 188.1
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 186.5
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 181.8
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 181.0
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 180.0
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 178.9
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 178.3
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 178.2
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 173.4
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 172.7
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 171.4
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 171.1
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 169.8
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 168.8
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 168.6
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 168.6
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 167.9
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 167.5
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 167.4
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 167.3
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 166.3
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 164.7
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 164.6
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 162.6
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 162.6
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 162.4
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 161.9
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 160.2
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 159.4
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 158.9
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 158.0
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 155.2
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 154.5
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 153.7
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 153.5
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 151.5
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 150.1
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 148.7
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 147.2
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 146.7
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 144.7
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 143.0
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 141.0
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 139.7
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 138.9
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 138.5
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 137.6
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 136.8
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 136.7
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 136.5
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 136.4
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 136.1
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 135.5
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 134.0
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 132.4
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 132.1
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 131.9
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 131.7
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 131.2
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 129.3
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 127.9
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 126.8
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 126.5
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 125.2
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 124.7
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 123.8
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 123.8
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 123.4
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 123.3
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 122.5
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 121.6
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 121.4
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 121.2
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 120.3
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 120.3
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 119.7
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 118.6
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 118.4
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 118.3
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 117.7
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 117.7
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 117.2
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 116.2
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 115.9
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 115.7
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 115.5
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 115.3
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 113.4
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 113.3
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 111.0
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 110.7
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 109.8
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 109.5
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 109.4
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 109.1
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 107.7
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 107.6
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 107.5
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 107.4
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 107.1
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 106.8
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 106.2
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 105.6
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 105.5
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 102.2
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 102.0
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 101.8
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 101.5
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 101.3
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 100.2
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 98.5
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 95.7
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 94.5
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 94.4
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 94.2
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 93.9
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 92.2
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 91.8
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 91.7
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 91.7
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 91.0
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 88.1
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 88.1
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 87.2
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 87.1
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 87.1
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 86.9
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 86.8
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 86.6
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 85.5
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 84.6
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 83.8
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 83.6
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 83.5
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 82.6
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 82.5
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 82.3
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 81.8
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 80.9
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 80.7
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 80.2
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 79.9
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 79.7
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 78.6
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 77.4
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 77.1
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 77.0
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 76.9
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 76.6
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 75.7
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 75.4
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 74.9
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 74.0
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 73.5
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 73.1
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 72.9
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 72.4
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 71.3
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 70.7
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 69.8
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 68.7
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 68.7
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 68.4
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 67.9
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 67.8
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 67.7
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 67.1
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 66.9
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 65.8
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 64.7
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 64.3
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 63.7
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 62.7
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 62.6
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 62.3
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 62.3
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 61.9
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 61.6
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 61.2
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 61.0
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 59.4
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 58.8
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 57.8
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 57.7
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 57.7
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 56.5
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 55.5
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 55.0
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 52.1
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 52.0
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 51.5
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 51.2
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 50.6
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 50.4
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 50.2
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 48.0
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 47.2
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 44.6
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 44.5
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 42.1
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 36.1
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 36.0
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 35.8
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 30.2
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 132.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 132.4
FF:10164-103B2 76 years, female 132.4

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 101.7
Pig sample Sample description nTPM
Caudate
nTPM: 101.7
Samples: 4

Max nTPM: 119.4
Min nTPM: 87.9
Sample A Female 119.4
Sample B Female 87.9
Sample C Male 98.4
Sample D Male 100.9

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