HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:145.5 nTPM
HPA:145.5 nTPM
GTEx:146.2 nTPM
FANTOM5:318.5 Scaled Tags Per Million
Pig:476.4 nTPM
Mouse:340.7 nTPM
Allen mouse:21.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA002728
Glial cells Not detected
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 145.5
Sample id Sample description nTPM
Hippocampus
nTPM: 99.1
1898 Male, age 80, left hemisphere 136.7
2621 Female, age 67, right hemisphere 110.2
2148 Female, age 91, left hemisphere 97.5
1855 Male, age 76, left hemisphere 86.2
2529 Female, age 94, left hemisphere 85.1
1911 Female, age 85, right hemisphere 78.8
Dentate gyrus
nTPM: 123.1
2530 Female, age 94, left hemisphere 165.0
1927 Female, age 91, both hemispheres 148.8
2528 Male, age 74, both hemispheres 136.5
2010 Male, age 76, both hemispheres 105.3
2246 Female, age 85, both hemispheres 92.3
2531 Female, age 67, both hemispheres 90.4
Entorhinal gyrus
nTPM: 130.1
2613 Female, age 94, left hemisphere 182.1
2764 Male, age 80, right hemisphere 144.5
1938 Female, age 85, left hemisphere 140.2
1787 Male, age 76, left hemisphere 129.2
2117 Female, age 91, right hemisphere 106.7
2686 Male, age 75, right hemisphere 78.0
Hippocampus, CA1
nTPM: 130.4
2749 Male, age 80, left hemisphere 218.7
2527 Male, age 74, both hemispheres 112.9
2082 Female, age 91, right hemisphere 109.3
2045 Male, age 76, both hemispheres 107.1
1873 Female, age 85, both hemispheres 104.1
Hippocampus, CA2
nTPM: 125.3
2249 Male, age 74, both hemispheres 154.9
1963 Male, age 80, left hemisphere 151.1
1892 Male, age 76, both hemispheres 142.3
2437 Female, age 94, left hemisphere 119.6
2113 Female, age 91, right hemisphere 95.3
1940 Female, age 85, left hemisphere 88.7
Hippocampus, CA3
nTPM: 128.9
2436 Male, age 74, both hemispheres 181.6
2137 Male, age 80, left hemisphere 161.6
2620 Female, age 94, left hemisphere 133.3
1867 Male, age 76, both hemispheres 118.1
1891 Female, age 85, both hemispheres 96.3
2861 Female, age 67, both hemispheres 82.4
Parahippocampal cortex
nTPM: 103.1
1990 Female, age 91, right hemisphere 137.8
1850 Male, age 80, both hemispheres 124.2
2693 Female, age 94, both hemispheres 122.4
2250 Female, age 67, right hemisphere 114.4
1933 Female, age 85, both hemispheres 112.2
2245 Female, age 91, both hemispheres 95.8
2532 Female, age 72, left hemisphere 88.3
2692 Male, age 74, both hemispheres 85.3
2018 Male, age 76, both hemispheres 82.6
2622 Female, age 67, right hemisphere 67.9
Perirhinal gyrus
nTPM: 145.5
1847 Female, age 91, left hemisphere 177.1
1794 Male, age 80, right hemisphere 175.6
2521 Female, age 94, right hemisphere 137.1
1841 Female, age 85, right hemisphere 128.0
2848 Male, age 76, right hemisphere 110.0
Subiculum
nTPM: 102.3
1977 Female, age 85, both hemispheres 139.8
1901 Male, age 80, both hemispheres 130.0
2619 Male, age 74, both hemispheres 118.9
2729 Female, age 91, right hemisphere 83.3
2042 Male, age 76, both hemispheres 78.6
2438 Female, age 94, left hemisphere 63.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 146.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 146.2
Samples: 197

Max nTPM: 340.8
Min nTPM: 20.3
Std nTPM: 56.6
Median nTPM: 133.4
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 340.8
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 282.7
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 274.9
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 270.1
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 264.1
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 260.4
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 258.0
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 257.6
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 254.4
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 252.0
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 250.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 318.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 318.5
FF:10169-103B7 60 years, female 344.2
FF:10153-102I9 76 years, female 292.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 476.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 439.5
Samples: 4

Max nTPM: 584.7
Min nTPM: 326.3
Sample A Female 584.7
Sample B Female 465.0
Sample C Male 381.8
Sample D Male 326.3
Entorhinal cortex
nTPM: 345.2
Samples: 4

Max nTPM: 383.0
Min nTPM: 282.7
Sample A Female 383.0
Sample B Female 339.5
Sample C Male 375.6
Sample D Male 282.7
Subiculum
nTPM: 364.6
Samples: 4

Max nTPM: 485.9
Min nTPM: 274.1
Sample A Female 485.9
Sample B Female 325.7
Sample C Male 372.6
Sample D Male 274.1
Ventral hippocampus
nTPM: 476.4
Samples: 4

Max nTPM: 625.4
Min nTPM: 289.5
Sample A Female 539.6
Sample B Female 289.5
Sample C Male 625.4
Sample D Male 450.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 340.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 307.6
Samples: 4

Max nTPM: 326.5
Min nTPM: 297.8
Sample A Male 306.6
Sample B Male 297.8
Sample C Female 299.6
Sample D Female 326.5
Hippocampal formation
nTPM: 340.7
Samples: 4

Max nTPM: 392.9
Min nTPM: 277.7
Sample A Male 277.7
Sample B Male 338.5
Sample C Female 353.6
Sample D Female 392.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 21.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 21.7
74635072 Antisense, RP_060215_03_C09, Mouse strain C57BL/6J (56 days, male) 21.7

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