We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
SLC22A17
SECTIONS
  • TISSUE
  • BRAIN
  • SINGLE CELL TYPE
  • TISSUE CELL TYPE
  • PATHOLOGY
  • DISEASE
  • IMMUNE CELL
  • BLOOD PROTEIN
  • SUBCELLULAR
  • CELL LINE
  • STRUCTURE
  • METABOLIC
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
  • SARS-COV-2
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Patient ID
Tissue
Category
Cluster
Reliability
Brain region
Category
Brain region
Category
Brain region
Category
Reliability
Cell type
Category
Cluster
Tissue
Cell type
Enrichment
Cancer
Prognosis
Cancer
Category
Cell type
Category
Cell lineage
Category
Cluster
Annotation
Disease
Location
Searches
Location
Cell line
Type
Phase
Reliability
Cancer type
Category
Cluster
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Protein structure
In atlas
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • TISSUE CELL

  • PATHOLOGY

  • DISEASE

  • IMMUNE

  • BLOOD

  • SUBCELL

  • CELL LINE

  • STRUCTURE

  • METABOLIC

  • SLC22A17
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Not detected
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:171.7 nTPM
FANTOM5:467.2 Scaled Tags Per Million
Pig:392.5 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA002728
Glial cells Not detected



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 171.7
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 171.7
Samples: 246

Max nTPM: 357.0
Min nTPM: 57.4
Std nTPM: 65.9
Median nTPM: 166.1
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 357.0
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 353.1
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 334.5
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 324.2
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 319.9
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 294.3
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 293.3
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 286.5
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 286.4
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 286.2
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 286.1
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 285.5
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 284.5
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 283.2
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 278.0
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 274.3
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 270.8
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 269.2
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 267.4
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 266.2
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 265.2
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 260.5
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 258.4
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 254.5
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 254.2
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 253.7
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 253.0
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 252.6
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 250.9
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 250.0
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 249.9
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 249.8
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 249.7
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 249.3
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 248.8
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 248.7
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 248.5
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 247.7
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 247.5
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 244.7
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 244.2
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 242.7
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 242.7
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 242.5
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 242.2
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 241.5
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 240.5
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 240.0
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 239.4
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 237.7
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 236.6
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 235.8
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 234.8
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 231.9
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 231.8
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 230.9
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 229.4
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 225.4
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 225.2
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 224.5
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 223.8
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 223.3
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 222.7
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 222.2
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 222.1
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 218.0
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 217.8
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 217.3
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 216.3
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 215.5
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 214.7
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 214.7
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 213.9
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 212.9
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 212.4
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 211.0
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 209.0
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 208.7
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 206.9
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 206.7
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 205.1
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 205.0
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 204.7
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 204.6
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 203.2
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 202.5
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 196.7
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 196.5
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 196.0
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 195.3
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 194.6
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 193.5
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 190.8
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 190.5
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 189.4
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 189.2
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 188.7
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 187.8
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 186.5
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 186.5
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 186.4
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 185.5
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 185.2
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 184.7
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 184.6
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 182.7
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 182.5
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 182.0
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 180.7
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 179.0
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 178.7
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 176.4
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 176.3
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 175.5
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 174.8
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 173.5
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 171.7
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 171.5
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 170.6
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 169.7
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 168.2
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 166.5
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 166.1
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 166.1
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 164.0
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 163.1
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 162.7
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 162.4
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 161.8
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 160.8
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 159.6
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 158.8
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 158.8
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 158.3
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 158.3
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 157.7
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 157.0
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 156.0
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 155.3
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 153.8
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 152.3
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 151.6
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 151.6
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 150.7
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 150.0
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 148.6
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 148.5
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 147.9
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 146.7
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 145.6
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 145.3
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 144.1
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 143.9
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 143.7
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 143.5
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 143.2
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 142.6
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 142.3
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 141.1
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 140.8
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 140.1
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 137.6
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 137.1
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 136.6
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 135.7
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 133.5
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 132.8
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 129.9
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 128.9
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 128.5
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 126.2
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 125.5
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 124.7
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 122.8
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 122.1
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 121.9
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 120.0
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 119.4
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 119.1
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 116.7
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 116.1
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 115.0
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 114.2
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 112.1
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 112.1
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 111.7
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 111.3
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 111.1
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 111.1
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 111.0
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 110.8
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 110.2
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 110.0
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 108.1
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 107.3
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 106.7
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 104.8
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 104.6
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 104.2
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 103.3
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 102.6
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 101.5
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 101.3
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 99.1
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 98.0
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 96.9
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 96.0
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 95.5
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 94.6
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 94.3
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 93.2
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 92.2
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 92.1
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 91.9
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 91.1
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 91.0
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 91.0
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 91.0
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 90.3
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 89.7
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 89.4
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 88.1
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 87.7
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 86.3
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 83.6
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 83.0
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 82.3
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 81.9
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 81.1
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 80.4
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 79.9
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 79.7
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 78.1
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 78.0
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 77.4
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 75.3
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 73.6
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 72.5
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 72.2
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 72.0
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 72.0
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 69.3
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 68.2
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 63.4
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 62.5
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 57.4
Show allShow less

CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 467.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 467.2
FF:10164-103B2 76 years, female 467.2

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 392.5
Pig sample Sample description nTPM
Caudate
nTPM: 392.5
Samples: 4

Max nTPM: 452.6
Min nTPM: 338.9
Sample A Female 345.0
Sample B Female 433.5
Sample C Male 452.6
Sample D Male 338.9

Contact

  • NEWS ARTICLES
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.