HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:27.2 nTPM
HPA:27.2 nTPM
GTEx:27.9 nTPM
FANTOM5:43.6 Scaled Tags Per Million
Pig:28.0 nTPM
Mouse:29.2 nTPM
Allen mouse:5.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA002929
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 27.2
Sample id Sample description nTPM
Hippocampus
nTPM: 22.9
1898 Male, age 80, left hemisphere 27.8
2529 Female, age 94, left hemisphere 23.4
2621 Female, age 67, right hemisphere 23.4
1911 Female, age 85, right hemisphere 23.0
2148 Female, age 91, left hemisphere 22.4
1855 Male, age 76, left hemisphere 17.5
Dentate gyrus
nTPM: 22.0
1927 Female, age 91, both hemispheres 25.4
2246 Female, age 85, both hemispheres 23.8
2528 Male, age 74, both hemispheres 22.6
2010 Male, age 76, both hemispheres 21.7
2531 Female, age 67, both hemispheres 20.1
2530 Female, age 94, left hemisphere 18.5
Entorhinal gyrus
nTPM: 24.0
1938 Female, age 85, left hemisphere 27.0
2764 Male, age 80, right hemisphere 25.9
2686 Male, age 75, right hemisphere 24.7
2117 Female, age 91, right hemisphere 24.4
2613 Female, age 94, left hemisphere 21.5
1787 Male, age 76, left hemisphere 20.9
Hippocampus, CA1
nTPM: 23.4
2749 Male, age 80, left hemisphere 31.5
1873 Female, age 85, both hemispheres 25.7
2045 Male, age 76, both hemispheres 20.9
2527 Male, age 74, both hemispheres 20.3
2082 Female, age 91, right hemisphere 18.4
Hippocampus, CA2
nTPM: 22.6
1963 Male, age 80, left hemisphere 27.6
1892 Male, age 76, both hemispheres 24.8
2249 Male, age 74, both hemispheres 24.2
1940 Female, age 85, left hemisphere 20.3
2437 Female, age 94, left hemisphere 19.5
2113 Female, age 91, right hemisphere 19.4
Hippocampus, CA3
nTPM: 24.1
2137 Male, age 80, left hemisphere 32.6
1891 Female, age 85, both hemispheres 24.2
2436 Male, age 74, both hemispheres 23.7
1867 Male, age 76, both hemispheres 22.9
2620 Female, age 94, left hemisphere 21.7
2861 Female, age 67, both hemispheres 19.5
Parahippocampal cortex
nTPM: 23.6
1850 Male, age 80, both hemispheres 32.7
2692 Male, age 74, both hemispheres 26.2
1933 Female, age 85, both hemispheres 25.5
1990 Female, age 91, right hemisphere 23.8
2532 Female, age 72, left hemisphere 23.1
2245 Female, age 91, both hemispheres 22.7
2622 Female, age 67, right hemisphere 21.5
2250 Female, age 67, right hemisphere 21.2
2693 Female, age 94, both hemispheres 20.9
2018 Male, age 76, both hemispheres 18.1
Perirhinal gyrus
nTPM: 27.2
1841 Female, age 85, right hemisphere 30.0
1794 Male, age 80, right hemisphere 29.6
1847 Female, age 91, left hemisphere 28.2
2848 Male, age 76, right hemisphere 24.4
2521 Female, age 94, right hemisphere 23.5
Subiculum
nTPM: 23.3
1901 Male, age 80, both hemispheres 27.6
1977 Female, age 85, both hemispheres 24.8
2619 Male, age 74, both hemispheres 23.5
2438 Female, age 94, left hemisphere 23.1
2729 Female, age 91, right hemisphere 20.4
2042 Male, age 76, both hemispheres 20.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 27.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 27.9
Samples: 197

Max nTPM: 38.3
Min nTPM: 18.0
Std nTPM: 3.4
Median nTPM: 27.8
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 38.3
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 37.4
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 34.7
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 34.7
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 34.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 34.5
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 34.5
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 34.3
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 34.2
GTEX-1H3O1-0011-R1b-SM-CL554 60-69 years, male 34.2
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 34.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 43.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 43.6
FF:10169-103B7 60 years, female 43.9
FF:10153-102I9 76 years, female 43.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 28.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 28.0
Samples: 4

Max nTPM: 31.3
Min nTPM: 22.7
Sample A Female 31.3
Sample B Female 27.4
Sample C Male 30.7
Sample D Male 22.7
Entorhinal cortex
nTPM: 26.2
Samples: 4

Max nTPM: 28.1
Min nTPM: 22.8
Sample A Female 27.6
Sample B Female 28.1
Sample C Male 26.3
Sample D Male 22.8
Subiculum
nTPM: 25.0
Samples: 4

Max nTPM: 29.9
Min nTPM: 22.9
Sample A Female 29.9
Sample B Female 22.9
Sample C Male 24.1
Sample D Male 22.9
Ventral hippocampus
nTPM: 25.9
Samples: 4

Max nTPM: 29.5
Min nTPM: 21.6
Sample A Female 29.5
Sample B Female 21.6
Sample C Male 26.1
Sample D Male 26.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 29.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 29.2
Samples: 4

Max nTPM: 37.8
Min nTPM: 25.0
Sample A Male 27.7
Sample B Male 25.0
Sample C Female 26.2
Sample D Female 37.8
Hippocampal formation
nTPM: 28.1
Samples: 4

Max nTPM: 36.3
Min nTPM: 20.9
Sample A Male 20.9
Sample B Male 32.6
Sample C Female 36.3
Sample D Female 22.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 5.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.7
357092 Antisense, RP_040617_02_A04, Mouse strain C57BL/6J (56 days, male) 7.5
71608374 Antisense, RP_050927_01_E12, Mouse strain C57BL/6J (56 days, male) 6.3
70611162 Antisense, RP_050630_02_B11, Mouse strain C57BL/6J (56 days, male) 3.3

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The Human Protein Atlas

The Human Protein Atlas project is funded
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