HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:275.3 nTPM
HPA:275.3 nTPM
GTEx:271.1 nTPM
FANTOM5:21.7 Scaled Tags Per Million
Mouse:246.2 nTPM
Allen mouse:8.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA051075Antibody CAB005223Antibody CAB075755Antibody CAB075756
Glial cells Not detectedHighLowNot detected
Neuronal cells HighHighHighMedium









HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 275.3
Sample id Sample description nTPM
Hippocampus
nTPM: 267.0
1898 Male, age 80, left hemisphere 279.6
1855 Male, age 76, left hemisphere 269.1
1911 Female, age 85, right hemisphere 266.7
2529 Female, age 94, left hemisphere 264.2
2621 Female, age 67, right hemisphere 263.5
2148 Female, age 91, left hemisphere 258.7
Dentate gyrus
nTPM: 266.1
2010 Male, age 76, both hemispheres 283.0
2246 Female, age 85, both hemispheres 270.6
2530 Female, age 94, left hemisphere 269.2
1927 Female, age 91, both hemispheres 266.9
2528 Male, age 74, both hemispheres 255.2
2531 Female, age 67, both hemispheres 251.7
Entorhinal gyrus
nTPM: 257.9
1938 Female, age 85, left hemisphere 271.0
2117 Female, age 91, right hemisphere 270.5
1787 Male, age 76, left hemisphere 263.0
2764 Male, age 80, right hemisphere 259.1
2686 Male, age 75, right hemisphere 250.9
2613 Female, age 94, left hemisphere 232.9
Hippocampus, CA1
nTPM: 275.3
2749 Male, age 80, left hemisphere 292.6
2045 Male, age 76, both hemispheres 282.8
1873 Female, age 85, both hemispheres 275.6
2527 Male, age 74, both hemispheres 265.0
2082 Female, age 91, right hemisphere 260.6
Hippocampus, CA2
nTPM: 261.3
2249 Male, age 74, both hemispheres 273.0
1892 Male, age 76, both hemispheres 269.3
1963 Male, age 80, left hemisphere 265.9
1940 Female, age 85, left hemisphere 255.6
2113 Female, age 91, right hemisphere 254.9
2437 Female, age 94, left hemisphere 249.3
Hippocampus, CA3
nTPM: 257.9
2137 Male, age 80, left hemisphere 287.7
1891 Female, age 85, both hemispheres 268.6
1867 Male, age 76, both hemispheres 268.3
2436 Male, age 74, both hemispheres 250.7
2620 Female, age 94, left hemisphere 240.4
2861 Female, age 67, both hemispheres 231.4
Parahippocampal cortex
nTPM: 257.8
2018 Male, age 76, both hemispheres 273.4
1850 Male, age 80, both hemispheres 269.0
1933 Female, age 85, both hemispheres 267.5
2245 Female, age 91, both hemispheres 262.6
2532 Female, age 72, left hemisphere 262.4
2250 Female, age 67, right hemisphere 261.8
1990 Female, age 91, right hemisphere 259.0
2692 Male, age 74, both hemispheres 247.3
2693 Female, age 94, both hemispheres 238.8
2622 Female, age 67, right hemisphere 236.2
Perirhinal gyrus
nTPM: 263.8
1794 Male, age 80, right hemisphere 272.0
1847 Female, age 91, left hemisphere 270.8
1841 Female, age 85, right hemisphere 267.4
2848 Male, age 76, right hemisphere 255.0
2521 Female, age 94, right hemisphere 253.5
Subiculum
nTPM: 264.5
1977 Female, age 85, both hemispheres 273.1
2042 Male, age 76, both hemispheres 271.3
1901 Male, age 80, both hemispheres 270.0
2438 Female, age 94, left hemisphere 266.3
2729 Female, age 91, right hemisphere 255.1
2619 Male, age 74, both hemispheres 251.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 271.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 271.1
Samples: 197

Max nTPM: 436.4
Min nTPM: 148.1
Std nTPM: 41.8
Median nTPM: 266.3
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 436.4
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 425.8
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 385.2
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 374.5
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 372.7
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 362.2
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 352.5
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 350.1
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 347.9
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 347.4
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 346.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 21.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 21.7
FF:10169-103B7 60 years, female 25.1
FF:10153-102I9 76 years, female 18.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 246.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 217.3
Samples: 4

Max nTPM: 239.9
Min nTPM: 192.8
Sample A Male 192.8
Sample B Male 207.7
Sample C Female 239.9
Sample D Female 228.6
Hippocampal formation
nTPM: 246.2
Samples: 4

Max nTPM: 258.5
Min nTPM: 233.6
Sample A Male 258.5
Sample B Male 234.7
Sample C Female 257.8
Sample D Female 233.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 8.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 8.2
100143529 Antisense, RP_110407_01_D06, Mouse strain C57BL/6J (56 days, male) 8.2

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.