HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:17.6 nTPM
HPA:17.6 nTPM
GTEx:26.9 nTPM
FANTOM5:32.3 Scaled Tags Per Million
Pig:15.9 nTPM
Mouse:6.5 nTPM
Allen mouse:0.5 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 17.6
Sample id Sample description nTPM
Hippocampus
nTPM: 17.1
1898 Male, age 80, left hemisphere 17.4
2621 Female, age 67, right hemisphere 17.4
2529 Female, age 94, left hemisphere 17.3
1855 Male, age 76, left hemisphere 17.1
2148 Female, age 91, left hemisphere 17.1
1911 Female, age 85, right hemisphere 16.5
Dentate gyrus
nTPM: 16.7
2528 Male, age 74, both hemispheres 17.2
2530 Female, age 94, left hemisphere 17.1
2010 Male, age 76, both hemispheres 16.7
2246 Female, age 85, both hemispheres 16.6
1927 Female, age 91, both hemispheres 16.3
2531 Female, age 67, both hemispheres 16.1
Entorhinal gyrus
nTPM: 17.2
2117 Female, age 91, right hemisphere 18.1
1787 Male, age 76, left hemisphere 17.3
1938 Female, age 85, left hemisphere 17.2
2764 Male, age 80, right hemisphere 17.1
2686 Male, age 75, right hemisphere 17.0
2613 Female, age 94, left hemisphere 16.5
Hippocampus, CA1
nTPM: 16.6
2527 Male, age 74, both hemispheres 17.1
2082 Female, age 91, right hemisphere 16.6
2045 Male, age 76, both hemispheres 16.4
2749 Male, age 80, left hemisphere 16.4
1873 Female, age 85, both hemispheres 16.2
Hippocampus, CA2
nTPM: 16.8
2249 Male, age 74, both hemispheres 17.3
1940 Female, age 85, left hemisphere 17.1
1963 Male, age 80, left hemisphere 17.0
2113 Female, age 91, right hemisphere 16.8
1892 Male, age 76, both hemispheres 16.5
2437 Female, age 94, left hemisphere 16.3
Hippocampus, CA3
nTPM: 16.8
1867 Male, age 76, both hemispheres 17.5
1891 Female, age 85, both hemispheres 17.2
2436 Male, age 74, both hemispheres 16.8
2137 Male, age 80, left hemisphere 16.6
2861 Female, age 67, both hemispheres 16.4
2620 Female, age 94, left hemisphere 16.3
Parahippocampal cortex
nTPM: 16.7
2692 Male, age 74, both hemispheres 17.4
1850 Male, age 80, both hemispheres 17.2
1990 Female, age 91, right hemisphere 17.0
2018 Male, age 76, both hemispheres 16.7
1933 Female, age 85, both hemispheres 16.6
2245 Female, age 91, both hemispheres 16.5
2250 Female, age 67, right hemisphere 16.5
2532 Female, age 72, left hemisphere 16.5
2622 Female, age 67, right hemisphere 16.3
2693 Female, age 94, both hemispheres 16.3
Perirhinal gyrus
nTPM: 16.8
1794 Male, age 80, right hemisphere 17.4
1841 Female, age 85, right hemisphere 17.3
1847 Female, age 91, left hemisphere 16.7
2848 Male, age 76, right hemisphere 16.4
2521 Female, age 94, right hemisphere 16.3
Subiculum
nTPM: 17.6
2438 Female, age 94, left hemisphere 18.1
2042 Male, age 76, both hemispheres 17.7
1901 Male, age 80, both hemispheres 17.6
2619 Male, age 74, both hemispheres 17.6
1977 Female, age 85, both hemispheres 17.5
2729 Female, age 91, right hemisphere 17.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 26.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 26.9
Samples: 197

Max nTPM: 49.7
Min nTPM: 16.7
Std nTPM: 5.4
Median nTPM: 26.1
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 49.7
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 49.6
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 42.3
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 41.8
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 41.5
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 40.9
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 40.7
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 39.1
GTEX-1GN73-0011-R1a-SM-CKZNT 60-69 years, male 37.1
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 36.6
GTEX-1E2YA-0011-R1b-SM-CJI29 50-59 years, male 36.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 32.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 32.3
FF:10169-103B7 60 years, female 36.6
FF:10153-102I9 76 years, female 28.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 15.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 15.9
Samples: 4

Max nTPM: 20.2
Min nTPM: 12.4
Sample A Female 20.2
Sample B Female 16.9
Sample C Male 12.4
Sample D Male 14.2
Entorhinal cortex
nTPM: 12.8
Samples: 4

Max nTPM: 13.6
Min nTPM: 11.5
Sample A Female 13.6
Sample B Female 13.4
Sample C Male 11.5
Sample D Male 12.6
Subiculum
nTPM: 10.8
Samples: 4

Max nTPM: 12.4
Min nTPM: 9.9
Sample A Female 12.4
Sample B Female 10.5
Sample C Male 9.9
Sample D Male 10.3
Ventral hippocampus
nTPM: 13.5
Samples: 4

Max nTPM: 17.3
Min nTPM: 11.2
Sample A Female 11.8
Sample B Female 11.2
Sample C Male 13.8
Sample D Male 17.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 6.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 6.1
Samples: 4

Max nTPM: 6.6
Min nTPM: 5.6
Sample A Male 5.9
Sample B Male 6.6
Sample C Female 5.6
Sample D Female 6.1
Hippocampal formation
nTPM: 6.5
Samples: 4

Max nTPM: 6.9
Min nTPM: 5.2
Sample A Male 6.8
Sample B Male 6.9
Sample C Female 5.2
Sample D Female 6.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.5
77620425 Antisense, RP_070205_01_H06, Mouse strain C57BL/6J (56 days, male) 0.5
71991804 Antisense, RP_051012_03_E05, Mouse strain C57BL/6J (56 days, male) 0.5
77414587 Antisense, RP_070205_01_H06, Mouse strain C57BL/6J (56 days, male) 0.0

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The Human Protein Atlas

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