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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:77.2 nTPM
FANTOM5:55.5 Scaled Tags Per Million
Pig:3.6 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA040052
Glial cells Not detected
Neuronal cells Not detected



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 77.2
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 77.2
Samples: 246

Max nTPM: 288.3
Min nTPM: 13.1
Std nTPM: 43.2
Median nTPM: 65.7
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 288.3
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 258.4
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 203.2
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 193.5
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 191.6
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 183.6
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 182.0
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 181.2
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 175.7
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 170.9
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 162.3
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 157.6
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 154.1
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 153.6
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 151.7
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 149.9
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 149.7
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 147.7
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 141.2
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 141.1
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 139.4
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 138.9
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 137.7
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 137.7
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 136.9
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 135.8
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 133.5
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 131.8
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 131.5
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 129.9
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 128.9
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 127.7
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 127.6
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 126.6
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 126.6
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 121.9
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 120.5
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 120.2
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 119.6
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 119.3
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 118.2
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 115.7
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 115.1
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 113.6
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 113.4
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 112.3
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 110.6
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 109.8
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 109.4
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 107.9
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 107.4
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 107.1
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 105.3
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 105.2
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 104.9
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 103.8
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 103.7
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 103.3
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 102.7
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 102.5
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 102.5
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 102.2
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 102.1
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 100.7
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 98.3
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 98.2
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 97.9
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 96.6
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 96.2
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 96.0
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 95.4
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 94.9
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 94.8
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 94.7
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 94.7
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 93.5
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 92.1
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 91.9
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 91.3
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 91.3
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 90.7
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 90.5
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 90.0
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 87.9
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 86.8
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 86.1
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 84.8
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 84.6
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 84.5
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 84.3
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 84.0
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 83.9
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 82.9
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 82.7
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 82.2
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 80.9
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 80.0
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 79.3
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 78.4
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 77.8
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 77.6
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 76.5
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 75.5
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 74.7
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 74.3
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 72.8
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 72.5
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 72.3
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 71.7
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 71.2
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 70.3
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 70.2
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 69.5
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 69.0
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 68.6
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 68.5
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 68.5
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 68.2
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 66.6
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 66.3
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 66.0
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 65.8
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 65.7
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 65.6
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 64.8
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 64.7
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 64.4
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 63.8
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 63.6
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 62.4
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 61.4
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 61.1
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 61.0
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 61.0
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 59.7
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 59.6
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 59.5
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 58.6
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 58.5
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 58.5
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 58.3
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 57.7
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 57.5
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 57.4
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 57.3
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 57.2
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 56.6
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 56.3
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 55.9
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 55.2
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 55.2
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 54.9
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 54.3
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 54.3
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 54.2
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 54.0
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 52.5
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 52.5
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 52.5
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 52.2
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 51.3
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 50.7
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 50.5
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 50.4
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 50.3
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 49.1
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 48.1
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 48.0
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 48.0
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 47.9
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 47.1
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 47.0
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 47.0
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 47.0
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 46.7
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 46.2
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 45.7
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 45.6
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 45.6
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 45.5
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 45.0
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 44.7
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 44.5
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 44.0
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 43.8
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 43.7
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 43.7
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 43.7
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 43.6
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 43.4
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 43.2
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 43.1
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 42.9
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 42.8
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 42.1
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 41.8
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 41.5
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 41.5
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 41.2
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 40.9
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 40.9
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 40.7
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 40.5
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 40.2
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 40.1
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 40.0
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 40.0
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 39.5
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 39.4
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 39.0
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 38.6
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 38.2
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 37.8
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 37.8
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 37.7
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 36.8
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 36.5
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 36.2
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 36.1
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 35.8
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 35.1
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 34.9
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 34.5
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 34.0
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 33.8
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 33.0
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 32.6
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 32.3
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 31.5
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 30.9
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 29.4
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 28.9
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 28.7
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 28.5
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 26.9
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 25.5
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 25.5
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 25.4
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 25.1
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 25.0
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 24.2
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 23.8
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 23.5
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 20.5
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 19.2
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 13.1
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 55.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 55.5
FF:10164-103B2 76 years, female 55.5

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 3.6
Pig sample Sample description nTPM
Caudate
nTPM: 3.6
Samples: 4

Max nTPM: 4.3
Min nTPM: 3.1
Sample A Female 3.7
Sample B Female 4.3
Sample C Male 3.2
Sample D Male 3.1

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