HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:13.0 nTPM
HPA:13.0 nTPM
GTEx:41.7 nTPM
FANTOM5:17.5 Scaled Tags Per Million
Pig:4.0 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA040125
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 13.0
Sample id Sample description nTPM
Hippocampus
nTPM: 10.9
2529 Female, age 94, left hemisphere 14.4
1911 Female, age 85, right hemisphere 12.6
2148 Female, age 91, left hemisphere 10.3
1898 Male, age 80, left hemisphere 9.7
2621 Female, age 67, right hemisphere 9.5
1855 Male, age 76, left hemisphere 8.7
Dentate gyrus
nTPM: 10.1
2530 Female, age 94, left hemisphere 18.6
2010 Male, age 76, both hemispheres 10.8
2531 Female, age 67, both hemispheres 9.4
2528 Male, age 74, both hemispheres 8.0
2246 Female, age 85, both hemispheres 7.1
1927 Female, age 91, both hemispheres 6.9
Entorhinal gyrus
nTPM: 13.0
2117 Female, age 91, right hemisphere 18.9
2764 Male, age 80, right hemisphere 15.5
2686 Male, age 75, right hemisphere 14.0
2613 Female, age 94, left hemisphere 11.7
1938 Female, age 85, left hemisphere 9.4
1787 Male, age 76, left hemisphere 8.4
Hippocampus, CA1
nTPM: 8.6
2082 Female, age 91, right hemisphere 11.8
1873 Female, age 85, both hemispheres 9.4
2527 Male, age 74, both hemispheres 7.9
2749 Male, age 80, left hemisphere 7.9
2045 Male, age 76, both hemispheres 5.9
Hippocampus, CA2
nTPM: 10.2
1963 Male, age 80, left hemisphere 13.9
1940 Female, age 85, left hemisphere 11.1
2113 Female, age 91, right hemisphere 10.5
2437 Female, age 94, left hemisphere 10.5
2249 Male, age 74, both hemispheres 8.7
1892 Male, age 76, both hemispheres 6.5
Hippocampus, CA3
nTPM: 7.9
1891 Female, age 85, both hemispheres 12.0
1867 Male, age 76, both hemispheres 10.9
2861 Female, age 67, both hemispheres 6.6
2436 Male, age 74, both hemispheres 6.5
2620 Female, age 94, left hemisphere 5.8
2137 Male, age 80, left hemisphere 5.5
Parahippocampal cortex
nTPM: 8.7
2692 Male, age 74, both hemispheres 13.0
2532 Female, age 72, left hemisphere 11.1
1990 Female, age 91, right hemisphere 10.7
2018 Male, age 76, both hemispheres 9.9
2245 Female, age 91, both hemispheres 9.3
1933 Female, age 85, both hemispheres 7.6
1850 Male, age 80, both hemispheres 7.5
2693 Female, age 94, both hemispheres 6.5
2622 Female, age 67, right hemisphere 6.1
2250 Female, age 67, right hemisphere 5.1
Perirhinal gyrus
nTPM: 6.3
2848 Male, age 76, right hemisphere 7.5
2521 Female, age 94, right hemisphere 7.3
1794 Male, age 80, right hemisphere 6.4
1847 Female, age 91, left hemisphere 5.8
1841 Female, age 85, right hemisphere 4.5
Subiculum
nTPM: 12.9
2042 Male, age 76, both hemispheres 17.8
1901 Male, age 80, both hemispheres 16.4
2438 Female, age 94, left hemisphere 12.6
1977 Female, age 85, both hemispheres 11.2
2729 Female, age 91, right hemisphere 10.1
2619 Male, age 74, both hemispheres 9.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 41.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 41.7
Samples: 197

Max nTPM: 144.5
Min nTPM: 3.1
Std nTPM: 22.2
Median nTPM: 37.5
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 144.5
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 115.2
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 113.3
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 105.7
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 104.1
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 93.5
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 91.5
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 89.6
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 88.5
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 85.8
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 78.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 17.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 17.5
FF:10153-102I9 76 years, female 20.5
FF:10169-103B7 60 years, female 14.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 4.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 4.0
Samples: 4

Max nTPM: 5.3
Min nTPM: 3.5
Sample A Female 3.5
Sample B Female 3.5
Sample C Male 3.5
Sample D Male 5.3
Entorhinal cortex
nTPM: 4.0
Samples: 4

Max nTPM: 5.1
Min nTPM: 2.9
Sample A Female 5.1
Sample B Female 3.9
Sample C Male 4.1
Sample D Male 2.9
Subiculum
nTPM: 3.8
Samples: 4

Max nTPM: 6.2
Min nTPM: 2.5
Sample A Female 3.2
Sample B Female 3.1
Sample C Male 2.5
Sample D Male 6.2
Ventral hippocampus
nTPM: 3.7
Samples: 4

Max nTPM: 6.6
Min nTPM: 2.6
Sample A Female 2.6
Sample B Female 2.6
Sample C Male 3.1
Sample D Male 6.6

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.