HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:96.6 nTPM
HPA:96.6 nTPM
GTEx:114.5 nTPM
FANTOM5:70.2 Scaled Tags Per Million
Pig:81.0 nTPM
Mouse:92.4 nTPM
Allen mouse:5.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA001169Antibody CAB011233
Glial cells LowNot detected
Neuronal cells LowLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 96.6
Sample id Sample description nTPM
Hippocampus
nTPM: 96.6
2529 Female, age 94, left hemisphere 105.3
1855 Male, age 76, left hemisphere 101.0
2148 Female, age 91, left hemisphere 94.1
1911 Female, age 85, right hemisphere 93.9
1898 Male, age 80, left hemisphere 93.8
2621 Female, age 67, right hemisphere 91.7
Dentate gyrus
nTPM: 93.6
2530 Female, age 94, left hemisphere 102.1
2528 Male, age 74, both hemispheres 99.6
2010 Male, age 76, both hemispheres 98.3
2246 Female, age 85, both hemispheres 90.4
2531 Female, age 67, both hemispheres 87.2
1927 Female, age 91, both hemispheres 83.8
Entorhinal gyrus
nTPM: 89.8
2117 Female, age 91, right hemisphere 112.2
2764 Male, age 80, right hemisphere 90.1
1787 Male, age 76, left hemisphere 89.3
1938 Female, age 85, left hemisphere 87.2
2613 Female, age 94, left hemisphere 80.8
2686 Male, age 75, right hemisphere 79.5
Hippocampus, CA1
nTPM: 92.0
2527 Male, age 74, both hemispheres 96.1
2082 Female, age 91, right hemisphere 92.6
1873 Female, age 85, both hemispheres 92.2
2045 Male, age 76, both hemispheres 91.2
2749 Male, age 80, left hemisphere 87.8
Hippocampus, CA2
nTPM: 92.5
2249 Male, age 74, both hemispheres 99.0
2113 Female, age 91, right hemisphere 95.0
2437 Female, age 94, left hemisphere 93.7
1963 Male, age 80, left hemisphere 92.1
1940 Female, age 85, left hemisphere 91.4
1892 Male, age 76, both hemispheres 83.9
Hippocampus, CA3
nTPM: 90.0
2436 Male, age 74, both hemispheres 95.1
1891 Female, age 85, both hemispheres 93.5
2620 Female, age 94, left hemisphere 93.3
2861 Female, age 67, both hemispheres 86.8
1867 Male, age 76, both hemispheres 86.0
2137 Male, age 80, left hemisphere 85.5
Parahippocampal cortex
nTPM: 86.5
2692 Male, age 74, both hemispheres 91.3
2018 Male, age 76, both hemispheres 90.0
2250 Female, age 67, right hemisphere 89.2
2245 Female, age 91, both hemispheres 88.6
1990 Female, age 91, right hemisphere 88.5
2532 Female, age 72, left hemisphere 88.4
2622 Female, age 67, right hemisphere 85.6
1933 Female, age 85, both hemispheres 85.3
1850 Male, age 80, both hemispheres 81.9
2693 Female, age 94, both hemispheres 75.8
Perirhinal gyrus
nTPM: 82.7
1794 Male, age 80, right hemisphere 85.1
1847 Female, age 91, left hemisphere 84.3
2521 Female, age 94, right hemisphere 84.1
1841 Female, age 85, right hemisphere 81.7
2848 Male, age 76, right hemisphere 78.4
Subiculum
nTPM: 93.9
2729 Female, age 91, right hemisphere 99.8
2619 Male, age 74, both hemispheres 97.8
2042 Male, age 76, both hemispheres 95.9
1901 Male, age 80, both hemispheres 92.2
1977 Female, age 85, both hemispheres 92.2
2438 Female, age 94, left hemisphere 85.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 114.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 114.5
Samples: 197

Max nTPM: 236.6
Min nTPM: 56.0
Std nTPM: 28.0
Median nTPM: 112.7
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 236.6
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 205.4
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 196.1
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 175.3
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 173.4
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 172.1
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 167.3
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 167.2
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 166.6
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 165.9
GTEX-1B933-0011-R1b-SM-9QEGW 50-59 years, female 165.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 70.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 70.2
FF:10153-102I9 76 years, female 87.0
FF:10169-103B7 60 years, female 53.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 81.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 72.2
Samples: 4

Max nTPM: 85.2
Min nTPM: 58.8
Sample A Female 85.2
Sample B Female 66.4
Sample C Male 78.5
Sample D Male 58.8
Entorhinal cortex
nTPM: 81.0
Samples: 4

Max nTPM: 89.0
Min nTPM: 67.5
Sample A Female 80.6
Sample B Female 86.8
Sample C Male 89.0
Sample D Male 67.5
Subiculum
nTPM: 72.7
Samples: 4

Max nTPM: 91.3
Min nTPM: 63.3
Sample A Female 91.3
Sample B Female 68.9
Sample C Male 67.2
Sample D Male 63.3
Ventral hippocampus
nTPM: 72.7
Samples: 4

Max nTPM: 97.0
Min nTPM: 54.2
Sample A Female 66.3
Sample B Female 54.2
Sample C Male 97.0
Sample D Male 73.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 92.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 86.8
Samples: 4

Max nTPM: 91.1
Min nTPM: 84.3
Sample A Male 84.6
Sample B Male 91.1
Sample C Female 87.0
Sample D Female 84.3
Hippocampal formation
nTPM: 92.4
Samples: 4

Max nTPM: 96.9
Min nTPM: 85.4
Sample A Male 93.4
Sample B Male 85.4
Sample C Female 94.0
Sample D Female 96.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 5.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.1
68301371 Antisense, RP_041130_01_B06, Mouse strain C57BL/6J (56 days, male) 5.1

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