HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:46.5 nTPM
HPA:46.5 nTPM
GTEx:42.0 nTPM
FANTOM5:67.9 Scaled Tags Per Million
Pig:31.7 nTPM
Mouse:27.9 nTPM
Allen mouse:0.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA014461Antibody HPA029413
Glial cells MediumNot detected
Neuronal cells MediumNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 46.5
Sample id Sample description nTPM
Hippocampus
nTPM: 42.3
2529 Female, age 94, left hemisphere 44.0
1898 Male, age 80, left hemisphere 43.7
2621 Female, age 67, right hemisphere 43.1
1911 Female, age 85, right hemisphere 43.0
1855 Male, age 76, left hemisphere 40.2
2148 Female, age 91, left hemisphere 39.7
Dentate gyrus
nTPM: 43.8
2528 Male, age 74, both hemispheres 46.3
1927 Female, age 91, both hemispheres 45.5
2530 Female, age 94, left hemisphere 45.5
2010 Male, age 76, both hemispheres 42.9
2246 Female, age 85, both hemispheres 42.2
2531 Female, age 67, both hemispheres 40.8
Entorhinal gyrus
nTPM: 43.8
2764 Male, age 80, right hemisphere 45.9
2613 Female, age 94, left hemisphere 45.4
1787 Male, age 76, left hemisphere 44.6
1938 Female, age 85, left hemisphere 44.5
2117 Female, age 91, right hemisphere 43.9
2686 Male, age 75, right hemisphere 38.7
Hippocampus, CA1
nTPM: 43.3
2749 Male, age 80, left hemisphere 47.3
1873 Female, age 85, both hemispheres 43.0
2527 Male, age 74, both hemispheres 42.7
2045 Male, age 76, both hemispheres 41.8
2082 Female, age 91, right hemisphere 41.4
Hippocampus, CA2
nTPM: 44.2
2249 Male, age 74, both hemispheres 47.6
1892 Male, age 76, both hemispheres 44.8
1963 Male, age 80, left hemisphere 44.8
2437 Female, age 94, left hemisphere 44.3
2113 Female, age 91, right hemisphere 42.5
1940 Female, age 85, left hemisphere 41.5
Hippocampus, CA3
nTPM: 43.9
2436 Male, age 74, both hemispheres 50.4
1891 Female, age 85, both hemispheres 44.8
2137 Male, age 80, left hemisphere 44.6
1867 Male, age 76, both hemispheres 44.4
2620 Female, age 94, left hemisphere 43.1
2861 Female, age 67, both hemispheres 36.1
Parahippocampal cortex
nTPM: 43.6
2250 Female, age 67, right hemisphere 46.1
1990 Female, age 91, right hemisphere 45.9
1850 Male, age 80, both hemispheres 45.6
2532 Female, age 72, left hemisphere 44.4
1933 Female, age 85, both hemispheres 44.2
2245 Female, age 91, both hemispheres 43.9
2018 Male, age 76, both hemispheres 43.2
2693 Female, age 94, both hemispheres 42.4
2692 Male, age 74, both hemispheres 40.7
2622 Female, age 67, right hemisphere 39.7
Perirhinal gyrus
nTPM: 46.5
1794 Male, age 80, right hemisphere 48.8
1847 Female, age 91, left hemisphere 48.4
1841 Female, age 85, right hemisphere 47.6
2848 Male, age 76, right hemisphere 44.1
2521 Female, age 94, right hemisphere 43.7
Subiculum
nTPM: 44.5
1977 Female, age 85, both hemispheres 46.3
2438 Female, age 94, left hemisphere 46.1
1901 Male, age 80, both hemispheres 45.1
2619 Male, age 74, both hemispheres 44.5
2042 Male, age 76, both hemispheres 43.9
2729 Female, age 91, right hemisphere 40.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 42.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 42.0
Samples: 197

Max nTPM: 73.6
Min nTPM: 24.7
Std nTPM: 8.0
Median nTPM: 41.4
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 73.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 72.8
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 69.3
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 62.9
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 61.7
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 58.1
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 56.6
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 56.4
GTEX-T5JC-0011-R1A-SM-32PM6 20-29 years, male 56.0
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 56.0
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 54.6
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 67.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 67.9
FF:10169-103B7 60 years, female 80.5
FF:10153-102I9 76 years, female 55.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 31.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 31.7
Samples: 4

Max nTPM: 43.8
Min nTPM: 21.7
Sample A Female 43.8
Sample B Female 31.7
Sample C Male 29.6
Sample D Male 21.7
Entorhinal cortex
nTPM: 24.4
Samples: 4

Max nTPM: 31.3
Min nTPM: 17.4
Sample A Female 25.9
Sample B Female 31.3
Sample C Male 23.1
Sample D Male 17.4
Subiculum
nTPM: 22.8
Samples: 4

Max nTPM: 31.9
Min nTPM: 18.1
Sample A Female 31.9
Sample B Female 21.8
Sample C Male 19.4
Sample D Male 18.1
Ventral hippocampus
nTPM: 28.0
Samples: 4

Max nTPM: 35.1
Min nTPM: 20.1
Sample A Female 35.1
Sample B Female 20.1
Sample C Male 30.5
Sample D Male 26.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 27.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 27.9
Samples: 4

Max nTPM: 29.3
Min nTPM: 25.2
Sample A Male 25.2
Sample B Male 29.3
Sample C Female 28.2
Sample D Female 28.8
Hippocampal formation
nTPM: 26.7
Samples: 4

Max nTPM: 29.6
Min nTPM: 24.7
Sample A Male 25.0
Sample B Male 27.3
Sample C Female 29.6
Sample D Female 24.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.3
69116516 Antisense, RP_050317_02_G05, Mouse strain C57BL/6J (56 days, male) 0.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.