COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: Not detected
Glandular cells: Medium
Peripheral nerve/ganglion: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:42.6 nTPM
HPA:41.4 nTPM
GTEx:42.6 nTPM
FANTOM5:53.3 Scaled Tags Per Million

COLON - Antibody stainingi
Antibody HPA035450Antibody HPA035451
Endothelial cells Not detectedNot detected
Glandular cells Not detectedMedium
Peripheral nerve/ganglion LowNot detected




COLON - HPA RNA-seqi
Average nTPM 41.4
overview
Male, age 54 		Colon sample 67
nTPM: 43.3
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 49.7
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 57.5
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 31.1
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 33.6
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 41.8
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 39.2
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 45.4
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 33.2
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 54.7
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 44.9
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 31.6
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 32.7
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 42.6
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 34.2
Samples: 373

Max nTPM: 113.6
Min nTPM: 19.2
Std nTPM: 8.7
Median nTPM: 32.6
GTEX-15RJ7-1726-SM-6PAL3 40-49 years, male 113.6
GTEX-W5WG-2026-SM-4LMIB 50-59 years, female 74.9
GTEX-WOFM-1926-SM-4OOSP 20-29 years, male 71.5
GTEX-WYJK-2326-SM-4ONDN 50-59 years, male 68.8
GTEX-13W3W-2226-SM-5LU4M 60-69 years, female 67.9
GTEX-1AMEY-1826-SM-72D5L 30-39 years, female 63.6
GTEX-Y5V6-1626-SM-4VDT2 60-69 years, male 61.6
GTEX-ZDTS-2726-SM-5L3E2 60-69 years, male 61.4
GTEX-VJYA-2126-SM-4KL1O 60-69 years, male 57.3
GTEX-WY7C-1926-SM-4ONCI 50-59 years, male 56.0
GTEX-1PFEY-1726-SM-DPRZ4 30-39 years, male 54.3
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Colon - Transverse
Average nTPM: 42.6
Samples: 406

Max nTPM: 121.3
Min nTPM: 15.7
Std nTPM: 14.5
Median nTPM: 39.3
GTEX-14PK6-1726-SM-6871J 70-79 years, female 121.3
GTEX-1399R-2226-SM-5P9JB 30-39 years, male 99.6
GTEX-1CAMR-0926-SM-7MXTD 20-29 years, male 89.8
GTEX-T5JW-1126-SM-4DM5V 20-29 years, female 85.4
GTEX-117YW-1826-SM-5PNY5 50-59 years, male 85.0
GTEX-Y3IK-1826-SM-4WWDS 50-59 years, female 81.9
GTEX-1JMPY-0426-SM-C1YQ3 30-39 years, male 81.8
GTEX-146FQ-1926-SM-5NQBY 30-39 years, male 80.8
GTEX-13O21-2426-SM-5MR4A 50-59 years, male 80.3
GTEX-YF7O-1726-SM-5IFJ9 50-59 years, male 78.1
GTEX-PWCY-1026-SM-48TD4 20-29 years, female 73.4
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 53.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 53.3
FF:10014-101C5 62,83,84 years, mixed 53.3

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The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.