HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:53.3 nTPM
HPA:53.3 nTPM
GTEx:50.5 nTPM
FANTOM5:56.5 Scaled Tags Per Million
Pig:20.2 nTPM
Mouse:52.4 nTPM
Allen mouse:0.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA072536
Glial cells Medium
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 53.3
Sample id Sample description nTPM
Hippocampus
nTPM: 45.3
1898 Male, age 80, left hemisphere 51.4
2529 Female, age 94, left hemisphere 45.6
2621 Female, age 67, right hemisphere 44.7
1911 Female, age 85, right hemisphere 43.7
1855 Male, age 76, left hemisphere 43.5
2148 Female, age 91, left hemisphere 43.1
Dentate gyrus
nTPM: 45.3
1927 Female, age 91, both hemispheres 47.5
2528 Male, age 74, both hemispheres 46.8
2530 Female, age 94, left hemisphere 46.5
2246 Female, age 85, both hemispheres 45.3
2010 Male, age 76, both hemispheres 43.2
2531 Female, age 67, both hemispheres 42.2
Entorhinal gyrus
nTPM: 48.9
1938 Female, age 85, left hemisphere 51.6
2764 Male, age 80, right hemisphere 51.1
1787 Male, age 76, left hemisphere 50.0
2613 Female, age 94, left hemisphere 47.7
2686 Male, age 75, right hemisphere 47.2
2117 Female, age 91, right hemisphere 45.8
Hippocampus, CA1
nTPM: 45.8
2527 Male, age 74, both hemispheres 48.7
2749 Male, age 80, left hemisphere 45.6
2082 Female, age 91, right hemisphere 45.4
1873 Female, age 85, both hemispheres 45.2
2045 Male, age 76, both hemispheres 44.3
Hippocampus, CA2
nTPM: 48.6
1892 Male, age 76, both hemispheres 54.8
2249 Male, age 74, both hemispheres 52.1
2437 Female, age 94, left hemisphere 49.6
1963 Male, age 80, left hemisphere 45.6
1940 Female, age 85, left hemisphere 45.4
2113 Female, age 91, right hemisphere 44.5
Hippocampus, CA3
nTPM: 47.6
2436 Male, age 74, both hemispheres 57.9
1867 Male, age 76, both hemispheres 51.0
1891 Female, age 85, both hemispheres 46.9
2620 Female, age 94, left hemisphere 44.1
2137 Male, age 80, left hemisphere 43.9
2861 Female, age 67, both hemispheres 41.9
Parahippocampal cortex
nTPM: 49.2
1850 Male, age 80, both hemispheres 53.3
1990 Female, age 91, right hemisphere 52.4
1933 Female, age 85, both hemispheres 51.5
2250 Female, age 67, right hemisphere 50.8
2693 Female, age 94, both hemispheres 50.7
2245 Female, age 91, both hemispheres 47.5
2532 Female, age 72, left hemisphere 47.3
2018 Male, age 76, both hemispheres 46.8
2692 Male, age 74, both hemispheres 46.2
2622 Female, age 67, right hemisphere 45.4
Perirhinal gyrus
nTPM: 53.3
1847 Female, age 91, left hemisphere 58.0
1841 Female, age 85, right hemisphere 54.0
2848 Male, age 76, right hemisphere 52.4
1794 Male, age 80, right hemisphere 51.5
2521 Female, age 94, right hemisphere 50.6
Subiculum
nTPM: 46.4
1977 Female, age 85, both hemispheres 50.7
1901 Male, age 80, both hemispheres 47.3
2619 Male, age 74, both hemispheres 46.8
2438 Female, age 94, left hemisphere 46.0
2729 Female, age 91, right hemisphere 44.5
2042 Male, age 76, both hemispheres 43.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 50.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 50.5
Samples: 197

Max nTPM: 172.7
Min nTPM: 12.2
Std nTPM: 22.9
Median nTPM: 44.7
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 172.7
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 142.2
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 130.5
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 121.6
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 104.6
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 102.5
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 100.9
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 98.4
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 97.1
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 96.0
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 94.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 56.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 56.5
FF:10169-103B7 60 years, female 69.0
FF:10153-102I9 76 years, female 43.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 20.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 20.2
Samples: 4

Max nTPM: 24.8
Min nTPM: 16.9
Sample A Female 24.8
Sample B Female 21.3
Sample C Male 17.8
Sample D Male 16.9
Entorhinal cortex
nTPM: 17.2
Samples: 4

Max nTPM: 20.1
Min nTPM: 14.8
Sample A Female 18.1
Sample B Female 20.1
Sample C Male 15.9
Sample D Male 14.8
Subiculum
nTPM: 17.1
Samples: 4

Max nTPM: 20.5
Min nTPM: 14.2
Sample A Female 20.5
Sample B Female 16.0
Sample C Male 17.7
Sample D Male 14.2
Ventral hippocampus
nTPM: 19.8
Samples: 4

Max nTPM: 24.0
Min nTPM: 16.3
Sample A Female 24.0
Sample B Female 16.3
Sample C Male 21.4
Sample D Male 17.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 52.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 52.4
Samples: 4

Max nTPM: 56.6
Min nTPM: 47.8
Sample A Male 50.8
Sample B Male 56.6
Sample C Female 54.4
Sample D Female 47.8
Hippocampal formation
nTPM: 48.0
Samples: 4

Max nTPM: 53.1
Min nTPM: 44.7
Sample A Male 53.1
Sample B Male 47.1
Sample C Female 44.7
Sample D Female 46.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.7
77620427 Antisense, RP_070205_01_H08, Mouse strain C57BL/6J (56 days, male) 0.7
77414600 Antisense, RP_070205_01_H08, Mouse strain C57BL/6J (56 days, male) 0.1

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The Human Protein Atlas

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