COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: Not detected
Glandular cells: Medium
Peripheral nerve/ganglion: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:32.7 nTPM
HPA:30.4 nTPM
GTEx:32.7 nTPM
FANTOM5:26.1 Scaled Tags Per Million

COLON - Antibody stainingi
Antibody HPA025735Antibody HPA025762
Endothelial cells Not detectedLow
Glandular cells MediumMedium
Peripheral nerve/ganglion HighHigh





COLON - HPA RNA-seqi
Average nTPM 30.4
overview
Male, age 54 		Colon sample 67
nTPM: 29.7
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 22.5
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 43
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 36.8
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 23.2
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 33.4
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 22.2
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 24.8
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 28.7
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 43.6
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 30.3
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 33.5
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 23.7
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 32.7
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 27.5
Samples: 373

Max nTPM: 91.7
Min nTPM: 8.0
Std nTPM: 8.4
Median nTPM: 26.7
GTEX-15RJ7-1726-SM-6PAL3 40-49 years, male 91.7
GTEX-ZDTS-2726-SM-5L3E2 60-69 years, male 51.8
GTEX-11TT1-0926-SM-5GU5M 20-29 years, male 51.7
GTEX-ZF2S-1826-SM-4WKFF 50-59 years, female 50.4
GTEX-11EQ8-2626-SM-5N9BO 60-69 years, male 50.1
GTEX-1LG7Y-2226-SM-E9U5K 50-59 years, male 49.4
GTEX-1RQEC-2626-SM-EVR3Z 60-69 years, male 48.6
GTEX-12ZZW-2426-SM-5DUWE 50-59 years, male 48.0
GTEX-ZPU1-1726-SM-4WWFV 40-49 years, male 46.5
GTEX-13W3W-2226-SM-5LU4M 60-69 years, female 45.8
GTEX-11P7K-1826-SM-5HL5A 30-39 years, male 45.6
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Colon - Transverse
Average nTPM: 32.7
Samples: 406

Max nTPM: 99.8
Min nTPM: 12.3
Std nTPM: 13.1
Median nTPM: 29.6
GTEX-1399R-2226-SM-5P9JB 30-39 years, male 99.8
GTEX-117YW-1826-SM-5PNY5 50-59 years, male 92.5
GTEX-146FQ-1926-SM-5NQBY 30-39 years, male 84.2
GTEX-TML8-1326-SM-4DXTO 40-49 years, female 74.9
GTEX-OOBJ-1426-SM-E6CHH 60-69 years, male 72.9
GTEX-13X6H-1926-SM-7EWD3 50-59 years, female 72.1
GTEX-1PIEJ-2026-SM-E6CPA 20-29 years, female 72.1
GTEX-1IKOE-2026-SM-AHZ31 30-39 years, female 71.7
GTEX-QV31-0826-SM-CKZNC 30-39 years, male 70.6
GTEX-SNOS-1226-SM-4DM5H 40-49 years, male 69.8
GTEX-1ICLZ-2426-SM-CKZOD 60-69 years, male 66.7
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 26.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 26.1
FF:10014-101C5 62,83,84 years, mixed 26.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.