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TISSUE PRIMARY DATA SPINAL CORD Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
SPINAL CORD - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:574.4 nTPM
HPA:574.4 nTPM
GTEx:1007.6 nTPM
FANTOM5:639.0 Scaled Tags Per Million
Pig:490.2 nTPM

SPINAL CORD - HPA Brain RNA-seq
Max nTPM 574.4
Sample id Sample description nTPM
Cervical spinal cord, central gray
nTPM: 509.6
2048 Male, age 55, midline 584.1
1981 Female, age 72, midline 520.9
2816 Male, age 47, midline 498.6
2565 Male, age 75, midline 473.1
2194 Female, age 79, both hemispheres 471.2
Cervical spinal cord, dorsal horn
nTPM: 561.2
2296 Male, age 66, both hemispheres 824.1
2173 Female, age 72, unknown 655.5
2069 Male, age 47, both hemispheres 565.4
1877 Male, age 55, unknown 547.8
2297 Male, age 75, both hemispheres 389.2
2721 Male, age 90, both hemispheres 385.2
Cervical spinal cord, ventral horn
nTPM: 574.4
2068 Male, age 55, unknown 671.5
2480 Male, age 75, both hemispheres 587.9
2098 Female, age 72, unknown 579.7
2809 Male, age 90, both hemispheres 560.9
2295 Male, age 66, both hemispheres 551.0
2820 Female, age 79, both hemispheres 495.5

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 1007.6
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 1007.6
Samples: 159

Max nTPM: 2123.6
Min nTPM: 242.2
Std nTPM: 372.0
Median nTPM: 997.5
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 2123.6
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 1975.0
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 1918.3
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 1858.2
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 1845.5
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 1833.3
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 1830.8
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 1822.6
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 1640.7
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 1567.4
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 1527.0
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 1500.1
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 1493.5
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 1468.1
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 1464.7
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 1437.5
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 1414.8
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 1413.0
GTEX-Q2AG-0011-R9A-SM-2HMJ6 40-49 years, female 1406.0
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 1402.7
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 1377.2
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 1374.8
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 1360.6
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 1352.6
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 1350.1
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 1344.7
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 1339.2
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 1329.7
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 1312.3
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 1308.5
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 1305.8
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 1296.9
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 1293.0
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 1282.8
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 1277.5
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 1276.9
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 1269.5
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 1268.7
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 1264.8
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 1263.2
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 1262.8
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 1220.7
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 1219.6
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 1218.1
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 1210.0
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 1200.6
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 1195.4
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 1195.2
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 1192.5
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 1178.4
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 1174.5
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 1173.2
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 1167.3
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 1155.8
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 1145.1
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 1137.3
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 1134.9
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 1128.7
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 1123.5
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 1122.6
GTEX-RU72-0011-R9A-SM-2TF67 50-59 years, female 1122.4
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 1112.1
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 1110.7
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 1110.3
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 1091.5
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 1090.8
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 1090.0
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 1089.7
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 1077.1
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 1071.6
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 1066.0
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 1064.1
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 1040.4
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 1036.1
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 1034.2
GTEX-1J1OQ-0011-R9b-SM-ARZMK 40-49 years, female 1030.8
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 1005.7
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 1005.0
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 1000.2
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 997.5
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 979.5
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 978.0
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 975.3
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 970.9
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 968.6
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 966.4
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 962.4
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 958.0
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 958.0
GTEX-18464-0011-R9a-SM-731BK 50-59 years, male 955.7
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 953.0
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 950.0
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 938.7
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 933.3
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 920.3
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 917.8
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 914.0
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 905.7
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 900.5
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 893.1
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 886.7
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 879.9
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 878.4
GTEX-RNOR-0011-R9A-SM-2TF52 50-59 years, female 871.8
GTEX-R55E-0011-R9A-SM-2TC6C 20-29 years, male 867.8
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 845.5
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 837.5
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 831.9
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 815.2
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 805.8
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 790.2
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 778.9
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 777.2
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 777.1
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 771.6
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 771.1
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 760.2
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 757.5
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 755.3
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 753.4
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 746.0
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 734.2
GTEX-QVUS-0011-R9A-SM-3GIJA 60-69 years, female 714.4
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 712.1
GTEX-NPJ7-0011-R9a-SM-2TC5R 60-69 years, female 709.2
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 690.9
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 689.8
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 688.2
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 684.5
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 683.0
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 672.4
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 656.4
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 638.1
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 636.1
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 627.2
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 612.5
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 612.0
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 610.0
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 594.9
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 591.1
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 561.8
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 507.7
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 504.7
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 502.7
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 501.5
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 485.3
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 480.3
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 478.7
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 466.8
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 453.6
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 419.0
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 377.9
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 338.1
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 336.1
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 315.1
GTEX-NPJ8-0011-R9a-SM-2YUN5 40-49 years, male 311.3
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 260.4
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 258.0
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 242.2
Show allShow less

SPINAL CORD - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 639.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Spinal cord
Scaled Tags Per Million: 639.0
FF:10181-103D1 60 years, female 759.5
FF:10159-103A6 76 years, female 518.6

SPINAL CORD - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 490.2
Pig sample Sample description nTPM
Dorsal spinal cord
nTPM: 371.1
Samples: 4

Max nTPM: 420.8
Min nTPM: 316.1
Sample A Female 316.1
Sample B Female 395.6
Sample C Male 351.8
Sample D Male 420.8
Ventral spinal cord
nTPM: 490.2
Samples: 4

Max nTPM: 580.8
Min nTPM: 439.8
Sample A Female 468.3
Sample B Female 471.7
Sample C Male 439.8
Sample D Male 580.8

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